EST details — SGN-E539810
Search information |
Request: 539810 | Match: SGN-E539810 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C190192 | Clone name: TUS-59-M6 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C77960 [cLES-3-N2] | Trace: SGN-T97822 | EST: SGN-E284801 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E539810 | Length: 548 bp (861 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E539810 [] (trimmed)
AATTGTAAGTAGATGTTTTGTTGTATTAACTTAATGATGCAGCAGCATAAAAAGTAGAATACATTTATTCAATGATGAAACAAAGACTCTGTTTT
CTCTATTGTATTAGATGGATTGAAGAATCAAATCTAATGGCTGAATTATTGGTATGTTACATATTTAACACCCATCAATGATTTCACAGACCAAA
CTCATCATCATTGTAGTAATGCTCCCTCAATCTTTCACAAAGTCGTGCTAAAGCATCAGCTCCTGTTCTTGAGGCGACATCCTCAACCACTGAAG
CATTGGATGGATTCACTGTTTCTGCAAGCCTAAATTCACACAGCTCTTTTAGAGAGCATGCATCAGTCAGCACTGCTGAATGTCCACCACCAGCA
GCCAATTTTCGGACTGCCCCAACACACCAATCAACTGGTGATGGACACCAGGCATATGTAGACTTCTCATTAGCCGCTTGACCATAGCAGTTATA
ACCCCATCCATGTATTCGTCCGTCTTTAGCAGAAGTAAGTGTGTGTGAATGACCACATGCAACGAGTTGCCTG
CTCTATTGTATTAGATGGATTGAAGAATCAAATCTAATGGCTGAATTATTGGTATGTTACATATTTAACACCCATCAATGATTTCACAGACCAAA
CTCATCATCATTGTAGTAATGCTCCCTCAATCTTTCACAAAGTCGTGCTAAAGCATCAGCTCCTGTTCTTGAGGCGACATCCTCAACCACTGAAG
CATTGGATGGATTCACTGTTTCTGCAAGCCTAAATTCACACAGCTCTTTTAGAGAGCATGCATCAGTCAGCACTGCTGAATGTCCACCACCAGCA
GCCAATTTTCGGACTGCCCCAACACACCAATCAACTGGTGATGGACACCAGGCATATGTAGACTTCTCATTAGCCGCTTGACCATAGCAGTTATA
ACCCCATCCATGTATTCGTCCGTCTTTAGCAGAAGTAAGTGTGTGTGAATGACCACATGCAACGAGTTGCCTG
Unigenes |
Current Unigene builds | |||||
[SGN-E539810] | SGN-U565337 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T340685 [Download][View] | Facility Assigned ID: TUS59M06_P1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.968 | Expected Error Rate: 0.0004 | Quality Trim Threshold: 14.5 |