EST details — SGN-E540078

Search information 
Request: 540078Match: SGN-E540078
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190348Clone name: TUS-60-C18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C74515 [cLES-10-B23] Trace: SGN-T99612 EST: SGN-E285472 Direction: 5' Facility: TIGR
Clone: SGN-C190348 [TUS-60-C18] Trace: SGN-T349201 EST: SGN-E548326 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E540078Length: 423 bp (878 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E540078 [] (trimmed) TTGGGAATAGAGAGGAATACCATCCTTGTCACTTAAGTGGTTTCTGTATTTCTTTAATTTTTGACACACTGCTTTAGAATTCATTGCCAATCTTA
AGTGCTTTTATAAGTTTTAACTCCCTTTCTCATCACATTCATCCTTTTTTTCCTTCCCCTTTGATATACTTGTATCACCATTGTTGTCGACCACA
AAACTGAAAAGATCTGGTCTCCAGAGAGAAGTCGTGACATTGTTTAGTTTCGTGTATAAACTCGAAGGTAGACAAAAGGTAACCCTCCTACAGCA
ACAAACATACTAGCGGCCGAAGGAACTATCCACATCGTGCATCTTCACTCTGGAAAAAAAATGTCCTAAATTGCGACCCATGCTATGTAACCAGC
TCAACTTTGCTTTGTGATGAGCTCAATGTCCACTCCAACTTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540078] SGN-U573868 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340953 [Download][View] Facility Assigned ID: TUS60C18_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0015 Quality Trim Threshold: 14.5