EST details — SGN-E540466

Search information 
Request: 540466Match: SGN-E540466
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190574Clone name: TUS-60-M4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C76263 [cLES-17-H18] Trace: SGN-T101469 EST: SGN-E289027 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E540466Length: 1737 bp (untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E540466 [] (untrimmed)
TTTTTTTTTCCTTTCTTTCTNNNNACTNNTTTTTTTATTCTTANNNNNNNATTTGTGTNNNNNNNNNGNCTNNTTANACNAAAGGAAAATAGAAT
TTATTATGAAGGAGTGCGGAAATGGGGACTACCCGTCGTCCCGCGCGCCGGCGGAAAGCGAGTGTTATGTTTTACTATAAAATAAAGAGGGGGNG
GGGANGATGCGTGCTTTCTCTCTTGTTCACCCCNCACAGTTTTTATATTTTGTTTGTGCACACGAGACTTCATTGCTAGGCGCCGCCACCTTCGA
CGCAGCCAACGAAGCGAGATACTCCTACAGTCTCTTCGCAGAACATTAAGACATCATATACTCATATAGTAAACAAATTACANTCTACCCCNCGA
CACAGATGAAGGATATGGAGGGACTTGATCTATTCGACCATAGTTGCGTAAACACACATACATACACAACTTCATTGTTAGAGAGCAAATGAATA
ACAAACAACGCGGACGCGACTGAGTACACGATCTATACCTAAGCGCTATATAGAGTACAGAAAGTCATACACCAAGAGACAGGAATGCATCTTGC
NACACATCCCTGTCTACTNCTCTTTATTCNTATCTTGTAACAGACCATGAACGGCTGTATTGTAATGTTGCCTGCACATACAAGAGAGTAGTTAT
GTCTGGAGACTAGGACACGTGTGCTCTTGGATAAAGAAGTAAATACGACCAAGAGACTACGTGGCGCAGAGAGCAGAGCTGTGAGTCGATTGAGG
CAGAGGCGACCGTCGCGACACTGCGTACGGTGAAATCACCGTAGAGAAACTTATAACATTACGCTCTTCAGAGAGCGATTCTGTGATGCGCCTTC
GCGGTCGGATGCGTGTGCGATACGGCCGAACCCCATATCGTGGAGTGCGCGACAGGAAGATCGTTGTTCATACAGTGTATTCGACGATACCCAGC
NTTATTCGTTGATATACATAGCGATCGAAGCAACGTNCAGTTCACTCACTCTCTCTACTCTGGACTAACAAACCAGTGGATCTCTCGCATATACC
AATGCGATCGTATCAGTCTCATATCGAACGGCCGGATACTCAAACCATGGAGAGGAAATATACGGCTAGCGGACATCGTCGCGCGTATTTGTGTT
TACACCTGCGGGATACACCAGCCCTGGCCTATGACCTAGTCTTCACGACGGAGCCGACGGAGACGCACTGANTACGACATCCACAAAGAGGACTN
CGTATTATACAGCACGCGTCGTGATATGCNCTCCTGGAGATATCTCTAAACTCTCTTCTCGCACCCAAAACACAGACACNCACAGAAAGAACGGC
ACGAAACAATAGTACACATGTCCATGATAAATGAGAACGATATAGTNGCTATGCGTTATTACGAGAGTACAAGATTAATACGACAGGACTACACT
AACAGAAACACACCACACGCGAGTGGATCGTGCACAGAGCACAAGCAGTAGATACGACACAGGAACGTACTCATGAGATAGCCTGTGCCTAGCTG
CCGACAGCGATCTTGTGTATAAATATACACCACGACGCAAAATCGTATAAGATATCAAGACGCGCAGTGTCAGGTCACAGCACAATGGTAAACTT
GCTACGCGTGTGACAACAACGAGCGAGAAGAGAAGCACAATGTATAGATAGAATGACAACGCGAGAGTGGCGTCGACATAGTGATAAGACATACT
ATATGCTGTCATTATTTCTTCTTTCTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T341341 [Download][View] Facility Assigned ID: TUS60M04_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Problems: High expected error (low overall quality)
Sequence Entropy: 0.000 Expected Error Rate: 0.2512 Quality Trim Threshold: 20.5