EST details — SGN-E540945

Search information 
Request: 540945Match: SGN-E540945
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190853Clone name: TUS-61-H19
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C80610 [cLET-12-N11] Trace: SGN-T105694 EST: SGN-E293231 Direction: 5' Facility: TIGR
Clone: SGN-C190853 [TUS-61-H19] Trace: SGN-T341823 EST: SGN-E540948 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E540945Length: 853 bp (903 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E540945 [] (trimmed) CAAGAAAACTTAGCATACAGATAGCATAATATCATGATATTGAAAACCTTAAGCTGAACATTGCTTGATTTTCAAAGTCAAAATTCATTTTCTGG
AGTTTCACATTTTTACTTTCTAAGATAACAATACAAAAGGGGGAGAAGAATAATACTATAAACAAACAAGATTTACAAAATTTTTGCCTTCATTT
TGCAGTACTTTCTTATGTCTGAGATGCAGCACTACCACTAATTATCAGTTGATCCAATTTTTCTCCTGACAAAATGCTCTCTTTTTCATCGATAT
CGTCGTCGTCGTCGTCATCATCATCATCACCACTTCCATCATCATAGTCATACTCGTCTTCATCATTATCATTGATGTTACTGGAAATACTGTCG
ACTATCAGCTCGTTGGCACATCCTGTGATTTGCTTAGCTTCCATCTGTTCTTCAGATGTTTTTGCCAAGGACAAGAGAATGTTCTTTGCTTTTTG
ATCAGGAGAGACACCTGAAGATGCCATTTCATTGAACCAAGCAACGGCACTGCCAAAATCCTTATTCCTACCATACGCGTCCATGATTGTAGTGA
AGATAGTTTGGTTAGTCTTGATACCATGAACCCGCATTTCTTCATATTTCTCCATCATCTTTTCGAGGTCATTTGTTTTTGCATATCCCTTAATC
AGTGCGCCATATGTAACAACATTGGGCTCCAATCCATCTTGCTTTATTCTTCTGAAAAATTTCTCTGCACCTTCCATATCTGATGCATTAATATA
AGCTGATAGCATTGTTGTGTATGAGCAAAGGTCAGGGCTACATCTGTCTCTTCGCATGCTTTTGAAGACAGTCCGAGCCTGTTCTACCATTCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540945] SGN-U603525 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T341820 [Download][View] Facility Assigned ID: TUS61H19_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0034 Quality Trim Threshold: 14.5