EST details — SGN-E541138

Search information 
Request: 541138Match: SGN-E541138
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190965Clone name: TUS-61-M11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82523 [cLET-20-E12] Trace: SGN-T107647 EST: SGN-E295233 Direction: 5' Facility: TIGR
Clone: SGN-C190965 [TUS-61-M11] Trace: SGN-T342015 EST: SGN-E541140 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E541138Length: 818 bp (906 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E541138 [] (trimmed) AAGAGAATCAAGACGGATATTATAGATATCGCCACACATGTTTAAAGTACAGAACATTTACAAGCATATATATGTTTGATGAAATTTTCTACTTT
ACAGTAATCTTATTCCACAACATATGTATAAGAATAGTAATTATAATATGTTAATCTTATGATAATTTGATGCAACACATATATATAAAGATGAT
CTTATATTTGATTTGAAACCCTGTAGTAATTTGTCAAAGTCTTCCCATCCAACTCCTTTGAAAAGAACCTCCCCATGTAATCCGTGTACATGAAT
TCGCGGTAAACTGCTGGCTTTTCATCTGATATCAGTTCAGGCAGAGGTCCAAATGAGTTCTCTCTTTGTCCTGGATTAAAGAAGATGGCAACTGA
TACGCGGGGTTCTTGGAAAGGGTTGGCTAGAACTCGGTGCACCACGCTCTTGTATTCATCATTCGATATTATCTGTAAGTGTGAAGTCGATTCAT
CATGATACATATTGTTCTGAGGAAGCATGAGAAATAAAAAAGATGTGCATTGAACCAGACTATGTTCAGGATGATAGCACCAGCAAAAGTCAAAT
TAAGCATATAAATAGTTGTTCTCGACACAGCATTTTGGTCTCAGTTGAGTCTACCATTACTACCCCGGGATGCCCGCCAGTCGGTCACCTCCTAC
CAGAAACAGATACCAGGTAATTCTGCCCACCGAGGCTAGGGACAATGGAAAGAGTCACCTAGTGTCTGTAGTCTCCACTGGGAATATGAACCTCN
AACCTCATGGTTCAGAACTACTTCATTGACCACTAGGTCAGTGCCTACTAATACTTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E541138] SGN-U594412 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T342013 [Download][View] Facility Assigned ID: TUS61M11_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0008 Quality Trim Threshold: 20.5