EST details — SGN-E541233
| Search information |
| Request: 541233 | Match: SGN-E541233 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191019 | Clone name: TUS-61-O17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C83296 [cLET-24-B12] | Trace: SGN-T108662 | EST: SGN-E296145 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191019 [TUS-61-O17] | Trace: SGN-T349390 | EST: SGN-E548515 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E541233 | Length: 803 bp (899 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E541233 [] (trimmed)
AAATAAAAAAATTCATCCAATTTCCCTAACTCTTTATCTTACCATGAATGACACAGTGGACAAGCTGGTAATTTTCTTAGCAAAGAGAGATGGAA
TCGACAAGCTTGTCAAGACTTTCCAGTACGTTTCCAAGCTCGTAAATTGGCACGTCGAGACGACGTACCCTGACTTAGCCACTCGAGCCAAGCAA
TGGGAAGTGGCTTCTGGCCTCAGCCGAAAAGCCTTCCGTACAGGTCGATCCCTCACGGGATTCAACGCTCTCCGAAGAAGCCCCGGGACCACCCC
GGGTTTCAGACTGCTCGCAGTTCTCGCCAATTCAGGGGAAATGGTTTATTTCTTCTTCGACCATTTCCTCTGGCTGGCGAGAATTGGAGTAATCG
ATGGTAAATATGCGAAAAGGATGAGCTTCATTTCAGCATTTGGTGAGTCTGTTGGATACGTATTTTTCGTTATTTCAGATTTTATTCTCATCACA
AGGGGATTAAAAGCAGAGAGGAAGTTATTGATTGAAGAGAAGGATTCTAAAGAAGAAATTAAGAAAATTAGAATGGATAGAATAATGAGACTGAT
GGGTGTGGCTGCTAATATTGCTGACCTTATAATAGCCTTAGCTGAAATTGAACCAAATCCATTCTGCAACCATACAGTTACTTTAGGCATTAGTG
GTTTAGTTTCTGCATGGGCTGGTTGGTATAGAAACTGGCCCTCCAAAAATAAATAGGATCAAAATTTTCAACAAGTTTATCATATCAATGTAACA
AACTTCAGTTATTATATGATCAAACGTTGCAATTTACTATTAC
TCGACAAGCTTGTCAAGACTTTCCAGTACGTTTCCAAGCTCGTAAATTGGCACGTCGAGACGACGTACCCTGACTTAGCCACTCGAGCCAAGCAA
TGGGAAGTGGCTTCTGGCCTCAGCCGAAAAGCCTTCCGTACAGGTCGATCCCTCACGGGATTCAACGCTCTCCGAAGAAGCCCCGGGACCACCCC
GGGTTTCAGACTGCTCGCAGTTCTCGCCAATTCAGGGGAAATGGTTTATTTCTTCTTCGACCATTTCCTCTGGCTGGCGAGAATTGGAGTAATCG
ATGGTAAATATGCGAAAAGGATGAGCTTCATTTCAGCATTTGGTGAGTCTGTTGGATACGTATTTTTCGTTATTTCAGATTTTATTCTCATCACA
AGGGGATTAAAAGCAGAGAGGAAGTTATTGATTGAAGAGAAGGATTCTAAAGAAGAAATTAAGAAAATTAGAATGGATAGAATAATGAGACTGAT
GGGTGTGGCTGCTAATATTGCTGACCTTATAATAGCCTTAGCTGAAATTGAACCAAATCCATTCTGCAACCATACAGTTACTTTAGGCATTAGTG
GTTTAGTTTCTGCATGGGCTGGTTGGTATAGAAACTGGCCCTCCAAAAATAAATAGGATCAAAATTTTCAACAAGTTTATCATATCAATGTAACA
AACTTCAGTTATTATATGATCAAACGTTGCAATTTACTATTAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541233] | SGN-U565969 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T342108 [Download][View] | Facility Assigned ID: TUS61O17_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0055 | Quality Trim Threshold: 14.5 |
Working
