EST details — SGN-E542912
Search information |
Request: 542912 | Match: SGN-E542912 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C191994 | Clone name: TUS-64-H8 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C91250 [cLEW-26-I7] | Trace: SGN-T114709 | EST: SGN-E302877 | Direction: 5' | Facility: TIGR |
Clone: SGN-C191994 [TUS-64-H8] | Trace: SGN-T343786 | EST: SGN-E542911 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E542912 | Length: 352 bp (911 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E542912 [] (trimmed)
GTTATGACTCATTGGGATGGATTATTGACTAAACCAGGCGAGCGTATTCTTGTTCTTGCTGCAACCAACAGACCTTTCGACCTCGATGAAGCAAT
AATCAGACGGTTTGAGCGCAGAATTATGGTCGGTTTACCTGCAGCTGAGAATAGAGAGAAGATTTTGAGAACTCTTCTAGCAAAGGAAAAGGTAG
AAGATCTTGACTTTAAAGAGCTCGGAGTCATGACCGAAGGGATATAGTGGAAGTGATCTTAAGAACTTGTGCACAACAGCAGCTTACCGGCCTGT
CAGAGAGCTTATACAACAAGAGAGAAAAGAAGATTTGGAAAAGAAACGGAGAACTGAAGAAAAGCAG
AATCAGACGGTTTGAGCGCAGAATTATGGTCGGTTTACCTGCAGCTGAGAATAGAGAGAAGATTTTGAGAACTCTTCTAGCAAAGGAAAAGGTAG
AAGATCTTGACTTTAAAGAGCTCGGAGTCATGACCGAAGGGATATAGTGGAAGTGATCTTAAGAACTTGTGCACAACAGCAGCTTACCGGCCTGT
CAGAGAGCTTATACAACAAGAGAGAAAAGAAGATTTGGAAAAGAAACGGAGAACTGAAGAAAAGCAG
Unigenes |
Current Unigene builds | |||||
[SGN-E542912] | SGN-U566431 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T343787 [Download][View] | Facility Assigned ID: TUS64H08_Q1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.956 | Expected Error Rate: 0.0066 | Quality Trim Threshold: 14.5 |