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EST details — SGN-E542953

Search information 
Request: 542953Match: SGN-E542953
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192018Clone name: TUS-64-I8
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C91333 [cLEW-26-P1] Trace: SGN-T114910 EST: SGN-E303078 Direction: 5' Facility: TIGR
Clone: SGN-C192018 [TUS-64-I8] Trace: SGN-T343827 EST: SGN-E542952 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E542953Length: 757 bp (886 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E542953 [] (trimmed) GTTATGACTCATTGGGATGGATTATTGACTAAACCAGGCGAGCGTATTCTTGTTCTTGCTGCAACCAACAGACCTTTCGACCTCGATGAAGCAAT
AATCAGACGGTTTGAGCGCAGAATTATGGTCGGTTTACCTGCAGCTGAGAATAGAGAGAAGATTTTGAGAACTCTTCTAGCAAAGGAAAAGGTAG
AAGATCTTGACTTTAAAGAGCTCGGAGTCATGACCGAAGGATATAGTGGAAGTGATCTTAAGAACTTGTGCACAACAGCAGCTTACCGGCCTGTC
AGAGAGCTTATACAACAAGAGAGAAAGAAAGATTTGGAAAAGAAACGGAGAACTGAAGAAGAGCAGAGTGCAGAAGGTAATTCAGATAAGAAAGA
AGAAGCCTCGGAAGAAAGAGTAATTACTTTGAGGCCTCTAAACATGGAGGACATGAGACAGGCAAAGAATCAGGTTGCTGCGAGCTTTGCTTCTG
AGGGATCCGTAATGAGTGAGCTGAAGCAGTGGAATGACCTCTATGGAGAAGGCGGTTCTAGGAAAAAGCAGCAGTTATCTTATTTCCTTTAGGTC
GTCAAATGTATGCATCAAGAAATGATTGTCAGCATTATTTTTCGTGAAAGGGGTGATAACCATGACCACTGCATAACCTTCAGAATCAAATCCCC
ATTCTCCTGAAACTAAGGTAGAGATACTTGAACCCTGTGCAACTGGTCTCCACTTCCCGAGGTCGTGACATGAATATGGATGAAATGTGTCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E542953] SGN-U566431 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T343828 [Download][View] Facility Assigned ID: TUS64I08_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0048 Quality Trim Threshold: 14.5