EST details — SGN-E542996

Search information 
Request: 542996Match: SGN-E542996
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192043Clone name: TUS-64-J9
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C91429 [cLEW-27-I18] Trace: SGN-T115019 EST: SGN-E302436 Direction: 5' Facility: TIGR
Clone: SGN-C192043 [TUS-64-J9] Trace: SGN-T343870 EST: SGN-E542995 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E542996Length: 645 bp (892 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E542996 [] (trimmed) GGGACACTTCTCCGTCGCTGCATTTCTTCGTCGGCGACCAATCAAACGCACCACCTTCCTTGTTCCCAGATTTCCCTTTCCAAAACCCATTTTTT
CACTTCACCACTTCCCCACTATGATTCATTTTCTTTTTCGCACTATTCTACCAGTTTCAGATCCTTTTCATCCCAATCCGGAAGGGATCAAGAAG
AAACAACCGCTCAGTCTCTTTCATCTGAGCTTGTTAAGGAGCTCGATGCAGAATCTCTATCAATTCCACAAAGTCTCGATCTTTCTTTCTCCCAT
GTCAATTTGACGCCTTCCCTGATCCTTACCACACTCAATCTTTCCCCAGATGCAGGCCGGACAGTATTAGGGTTTTTCAAGTGGGTTAAGTCTAA
GGAAAGTTTCAAGGTTGATGATGAGGTTGTGTCTTGCTTTGTGGATTATTTTGGAAGGAGAAAGGATTTTAAAGCTGCCCAGGATGTACTTATTG
ATGGGATAGGGTTAACGGGAAGGAAGACGTTAGAATCCATGGTTGATAGACTTGTTAGGGCTGGAAGACCCACTCAGACAGTAGCATTTTTTGAA
AATATGGAGAAAGATTACGGTTTAGCGAGGGATTAAGATTCTTTGAAGTTGGTAGTTTCTAGGTTGTGTGAGCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E542996] SGN-U574713 Tomato 200607 Build 2 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T343871 [Download][View] Facility Assigned ID: TUS64J09_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.969 Expected Error Rate: 0.0053 Quality Trim Threshold: 14.5