EST details — SGN-E543468

Search information 
Request: 543468Match: SGN-E543468
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192318Clone name: TUS-65-E20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C95205 [cLEX-9-P8] Trace: SGN-T116518 EST: SGN-E301733 Direction: 5' Facility: TIGR
Clone: SGN-C192318 [TUS-65-E20] Trace: SGN-T349758 EST: SGN-E548883 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E543468Length: 412 bp (858 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E543468 [] (trimmed) CCAGAAATGGTTAAACATCTCTATTGACAACTAAAGTTATTTTCTTACAACTACATATGAACTCAGATGTTTAATTACAATTCAACTTTGGATTT
GATTTACAATAACTCACCTGTGACAATCTACTAATCATTTGCTCACACTCTTGGCAGCATTTGTTACTGCACCCCAAAAAGAAGCTGTGGAAAAA
GGAGATAGTTGAAGAAAAAATCAGCCCAGGCTAGGCAAAGGAGGAGGTCAACGGCTGCAAACCTCTCGTACCAGGACCCAGTGATGGGGGGCAAT
CAATCAAGAAGGAAAGCNTTGGTATTTACATAAAAAGGGTTACTTGATATAGCCATAGACATATATCATAGGAATGGTTAGTCAAAACTTGAAGA
GCGACTAAATCTCCCTTGCAAATAATCCCTCC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E543468] SGN-U584364 Tomato 200607 Build 2 6 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T344343 [Download][View] Facility Assigned ID: TUS65E20_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.963 Expected Error Rate: 0.0062 Quality Trim Threshold: 14.5