EST details — SGN-E543539

Search information 
Request: 543539Match: SGN-E543539
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192359Clone name: TUS-65-G13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C92277 [cLEX-10-L17] Trace: SGN-T116593 EST: SGN-E304819 Direction: 5' Facility: TIGR
Clone: SGN-C192359 [TUS-65-G13] Trace: SGN-T344413 EST: SGN-E543538 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E543539Length: 776 bp (903 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E543539 [] (trimmed) GGTCCAATTATTTTGGAAGTCATATCATTTTTTTCATTGAACTAGCTAGACGCTATCGATTCGTAATTGAGATGGAATATGATCCATCGATTGAG
AAAAAGGCTATTGATGATACAAAGGCCGGTGTTAAAGGACTAGTTGATTCAGGAATAGTCGAGATTCCAAGAATTTTCATTAGGCCATCTCATGA
ACTTGCTGAGGAGTTGAATATGTGCAGGTCAACTCTACAGGTTCCAGTGGTGGATCTAAGTGGCATAGAAGTTGAAGATCGACGTAAGAAGATTG
TCGATGAAATAAGGGATGCATCTGAGAAATGGGGATTTTTTCAACTGATAAATCATGGGATTCCTTCAAGTGTTTTGGAAGGAATGATTGATGGA
ACTCGTAAATTTCATGAACAAGATGTCGAAGTGAAGAAAGAGTACTATTCGTCTGATCCAAGACGAGGAGTTAGATTTGAGAGTAATCTTCAACT
GTTGACAACAAAAGGTAGAAATGCAACCTGGAAGGATACATTGTATATCTCTAAGTCAGTTTCTGAACCTGAAGAAATACCAGAAGTTTGCAGGA
AAATATTGGTTGAGTACAAAAATCATGTTATAATACTAGGGGACATTCTTCTTGGCTTACTATCAGAAGCTCTTGGGCTAAAACCTGACCACTTG
AAAGCCGCGGATTGTAACAAAGGACTAATGTTGGCATGTCATTACTACCCGGCATGTCCACAGCCAGAGCTGACTCTTGGTACCGGTAAGCATAC
AGATCCTGTTTTCCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E543539] SGN-U578099 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T344414 [Download][View] Facility Assigned ID: TUS65G13_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.978 Expected Error Rate: 0.0070 Quality Trim Threshold: 14.5