EST details — SGN-E543876

Search information 
Request: 543876Match: SGN-E543876
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192555Clone name: TUS-65-O17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C93385 [cLEX-14-I6] Trace: SGN-T118247 EST: SGN-E305761 Direction: 5' Facility: TIGR
Clone: SGN-C192555 [TUS-65-O17] Trace: SGN-T344750 EST: SGN-E543875 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E543876Length: 1969 bp (untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E543876 [] (untrimmed)
CCCCCCTGGGGCCNNNTNCAANATANNCCCCNNNCNNNNNTGTCCTNNGCTGNNCTCCGGTNNTGNGGTCCNCCCNCNNANCTNNNNACANNANA
GGCAAAGTGGACCGGGGGGCTTTTCCTCTCCGCGCGGGGCGGGGTGACGGCGGCGCGCCCTCTGGGGTCCTCCGTGGGGGGAGGTTCCCCCCCTC
GGTGTGCCCGCGCTGGGGCGCTGTTGCTGGGCTTCCTACGGGGGCGGTCGCTGCGTGCCCCCCGCGGTGCTTCCGCCGCGCGTNTGGTTGTTGCG
CGTTGGCCGCGCGGGGTGTGCGCCCCTTTCTTCTCNCCGCCGTGTTTTGTCTACATCCTTGGTTGCCTGTCAGGGCGCGGGGTGGTGCCGCGCGG
CGCCGGGTGTGGTGCGCGTGTCGCGTGTTCTCTCCTTTCTCTGCTTTGCCGGTTCTTGTCCGCTTGCTGGTGTCGCCCGGCGCCGTGTTCGCGGT
TCTTCCGGCGGCGGTTCTGCGGTGTGTTGCACGGTCTCCGCTTCAGTCATGCACGTTGTGTTCGTGCTGCGCGACTCGCGTGGTGCCTCCNCGCG
TTTGCCGTCCTCTCTTGCCCGCTTCATNTCCTCTTGTTCTGTGTCCGCTCTGGTGCGTGTGCGGGTGCCGCCCTTGTGCCGGCGCTATTCGGCTG
ACTTGTGGTTCTTTCCGCTCTACACGTGCTTCTAGTGGCCTGTTTNGCCGCGCGCGCCTTCTGTGGGCGTGTGTGCTGCGCTTGCGTGNTGAGCT
CNGTGTGTGCGTCGTCGGGGGGNGTNCCTGTCCGCGCGGTCGTGTTGTACGTGCCGCGTTGTCAGCAGCATGGCCTATCGCGGCACTGTTGGGTT
GTCCATGCCGTCTGGTCGGCTGCGCGCCTGCACGCCGCTGGCCTAGCTGGCCCGCGCGGGAGTCCTCGGTCGGCTGTGTGTTTGTCTGGTCGCTG
TGTGCCTCCGGCCTGGCCTGCCGCTGCGCTGTGCGGCTGTTGGCTCTCATCGCGCGGTGAGTCACGTATGTCGTTCTCCTCTCGTGCGCGCGGTG
GTTGGTTGCGGTCTGTGGCGTGTCCTGGTGGCTCTGCGCGTGTGGCTGTGCTCCGTCGTGCTCCTGCGCGTTGTGCGCGGCCGCGGCCGGACGAG
CGCGGCCGCGTCTAGTCACTGCATGTCCCCCTTAGGTGCGCATTGTGGCTTTGGACCTCGCGTGCGCTGTCGTCCGGACTGTTGTCGTCAGTCGT
TCGCGCTGTTTTCTGATTGACCGTCGTACGTCGTCCTTGGTCAGTCCTATACGGTCGCCCTAATGTGTGCATGTGCTCGGGTCTGTGTGAGCCAG
CGGCGGCGCTGACGCTCTTCNCGTNCTGTGCTGTGTGTTGCCGTCCTCTACTGCCGCGTCGGTGCGTGTGTCTCTGTGCCTGTATTTCCCTTTGC
ACACGTGTCCACCTCGATTGCTGTGNGTGAGACGCGCTGCACGTGATATCTTCGTGCTGGGGTGCGGTGCGNCGCCATGTGCCTCGTGCGCCTCA
CTACAACGTGTTCCGTGCATTCACTCTGTGTCTTNTGTGCCGCTCGATCGCTGTACGCGAGTGTCNCGCTGCATCGGCTGTGAGGTACATTAGCC
TCTNACGACGTGGTCATCGCGGTGCGCACGCGGGCTGTTACGCAGTCGTGGNGTGTGTGTCTATATGAGCGTGTGGTCCGNTGTGTACGCGGCNC
GTGTNGTGCGTATCTCCGCGTGANCTGGCAGTGTACGCGTGNCGTCTGTGTNCGCGNNACGCTTCTCTGGTTTGTGTCGNTGTGTGCTGCGTCAC
CGTNCGCGCCGTGTGTGTCTGGGTTTGTGCGGNCCGCGATCTCGTCTTGACTCACTGTCTGCTAGTGCATACTGCCACTCTGACACGCTTTCGTG
GACTTTTCCCNTCCGTCGGGTTGTGTGTCGTGCTGCTCGTGCNCGACGTGCTGTCGCTGCGACTGTACG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T344751 [Download][View] Facility Assigned ID: TUS65O17_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Problems: High expected error (low overall quality)
Sequence Entropy: 0.000 Expected Error Rate: 0.0043 Quality Trim Threshold: 20.5