EST details — SGN-E543917

Search information 
Request: 543917Match: SGN-E543917
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192579Clone name: TUS-65-P17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C93567 [cLEX-15-B11] Trace: SGN-T117928 EST: SGN-E305442 Direction: 5' Facility: TIGR
Clone: SGN-C192579 [TUS-65-P17] Trace: SGN-T344791 EST: SGN-E543916 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E543917Length: 1806 bp (untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E543917 [] (untrimmed)
ATTACTTNNGGCCNNATNNNANNCANNNTNANNGGANACCGCTGNGCGCGCGCGNNTTNGANNNAGGAAGNGNNNNCNNNNCNTTNNTNNNGNCN
CCAATTAATAGCTTTGCANNCCCCCACCCCCCTCTTTTCGGCCTACGCCCCGCTTCCTTAGCCGTATGTGCTTGTTGTTCCCTCCCCCTGGGGCT
CTGCTGAGAGCACGTTACTATTCTCTCCATTCGTACACCCTTCTGTTCGTGTGCTAGCCTACTCTCTATTTTTGTCCGACGCCGNATTTAGATAG
TCATTATGATCGGGTCTAGTGTGCTCTGCTATCCGTTATGTCGCTCCCTTGGCTGCACAAGGGGAAGCGTCGCCGAGTACGCTCTGCTTGCCGCC
AGTGAGCCGCGCTCTCGTTCTGTTTTGCCGTTTATACTGGTTCATCTCCCATACGCGGCCGACCTCTGCTTGTTCGCGCCCGGTGTGTGACTTCC
TGCATTGTCTGTGCTCCGTTGTTGCGTCTTTTGATCGGCTTGTAGCTCTTCGCCGCATCTCCCTGTATCACCGCGAGCGCTTGATTGTGTTCGTG
CTATGCGTGTCGCGTTGGCACCGCGGTTTGTTGTATTACGGTCCTACACGCCGTGCTAGTCTCCCCTTACCTCCTGCTCGCCGTCGTATTCTCTG
ATGCTTACCTATTTCATACTCGCTTTTGTCATTATCTTTGCCGCGTGTATATGTTGTACGCGATGATTTCGCCCTTCTATCCGCGTTTTGCTCTA
ACGCGCGTCCGTCGCGTGTTATCGTTATNCTTGCTCCACTCGTTGCGCTGCCGACTAGCCCTATGCTTTGGTTATCGCGGTGCCATGCCCTCTCC
ATCCTTACCGTGTACGCATCGAATAAGCCATGCTCCTCGTATTGTTTGTCCGTATAATCTGCTTACCGATGTGATCGTATCACTCGCGCTCACTG
TTTCGGCACCTTATCATTCGGTGTGCCGCGTGATCCTGTTATCTGCCTTATTGTCCACGTCTTGTATGCTAGCGCCTGTCGACTACAGATCTCAC
GACATGTTTCCGCACGTCGACGTACCCTTGTCGCTCCATGCGTCCGTGTCGTGTGCACTTCACGTCGTGGTGCCGTGATCGGTATTACGTCGGGC
TCGTGTCTCTCGTCACTGATCGCTGTCTAGGAATTCACACGTATTCTGTACTGGAGCTCTACCTCGTTGCGTGTTTGTGTCCGTTGATTTGGCTG
TCATTACCGTCGTCAGCTGATCTATTGCTGTCTGTCAGTGCGCCCGTGTCTTGCTGTCGTCACGTCTTTCGCTCGTCTCTCTCACGCGCTATATT
TTCGACTATCTTACGCTGCCCACGCCTGTGATCTTCTTCCGCGGCCGTACCTGCTCTCATCACAGAGTTCTCTATATCCTCTCGTGACCACGTCC
TCGTGAATCAGACACATGAGTCTGAGGTTTGACTGTGCTATGTACTCACGTCACTCCTAGTGTCAGATCTACCGCGCCGACTGTAGATTATCGTA
CGCCGCGCGATTCTGTACTACTGCCCATCATCTCGAACATGTATGTGTCATTGATCGCTCGAATTAACTATACACATATGAGTACAGTGCTATAT
AGGNACGGAGTTGNGCGCGTGACAGNTCCCCACTACATTAGATTCTTCNGTCTGCATAGCTAGTCTATGTGTGACTGTCATACGTCAGCTCTGGC
ATTACGCGACATGTAGTGCTTCGCCGCCCGCCAGTCGTATGACTCTCGATGCTGTGTCTATGCCGCGTTGCTCTGTCTGCGATGGTCATGTATGC
N
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
No current unigene builds incorporate this sequence
Chromatogram 
SGN-ID: SGN-T344792 [Download][View] Facility Assigned ID: TUS65P17_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Problems: High expected error (low overall quality)
Sequence Entropy: 0.000 Expected Error Rate: 0.0562 Quality Trim Threshold: 20.5