EST details — SGN-E543954

Search information 
Request: 543954Match: SGN-E543954
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192601Clone name: TUS-66-A15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C93702 [cLEX-15-H2] Trace: SGN-T117980 EST: SGN-E305494 Direction: 5' Facility: TIGR
Clone: SGN-C192601 [TUS-66-A15] Trace: SGN-T349838 EST: SGN-E548963 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E543954Length: 605 bp (889 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E543954 [] (trimmed) GGGGAAAAGTTTAAAAAAATTTTCGGGGCTTTTACCCGGGTTTCTTTTTTTTAAAAACCCCCCCCAAAACGCCCCCCGGGAAAAAAAACAGGGGG
GAAAAAAATTAAACCCCCACCCGCCTTTGGCCAAAACCCCAAGGGTTTGTTTTTTGGGGGAAAAATTTTTTAACCCCCCCCCTTTTCAGGACCCC
CCCCCCCAGAAATTTCCCCCCCTTTTTTTCCCCCCCCCAAAAGGGGGGGGGGGGCCCCCGGGGGGCGTTTCCCAAGGGGGGAAAGTTTTTTTTGG
ACCCCCCCCCGGGGGGCCCAATTCCCCGGGCCAAATTCCCCCCCCCCGGGGGACCCCCCATTTTTAAAGGGGCCCCCCCCCGGGGGGAACCCCCC
CTTTTTTCCCCTTTGGGGGGGGGAAATTTCGGGGTGGGGGAAAACAGGGGCAAAGGGTTTTCCGGGGGAAAATTGTTTTCCCCCCCAAATTCCCC
AAAAAATAAAACCCGGAAAAATAAAGGGAAAACCCGGGGGGCCCCCATGGGGGGGCCCCCCCCCTTTAATTGGGTGGGGCCCACGGCCCCCTTTT
CAGGGGGGGAAACCTTTGGGGCCCCCTCCATTAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E543954] SGN-U598927 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T344829 [Download][View] Facility Assigned ID: TUS66A15_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.742 Expected Error Rate: 0.0196 Quality Trim Threshold: 12.5