EST details — SGN-E544280
| Search information |
| Request: 544280 | Match: SGN-E544280 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192791 | Clone name: TUS-66-I13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C95649 [cLEY-12-L17] | Trace: SGN-T119158 | EST: SGN-E307449 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192791 [TUS-66-I13] | Trace: SGN-T345156 | EST: SGN-E544281 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544280 | Length: 770 bp (888 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E544280 [] (trimmed)
GTAACATATAAATGTTCAGACTGCAAAACACCATCATCCTTCAATTCTCTTCACAAATCAAACTGAATTTTTTTAAAAAAAAGGAAAGGGAAGGG
GTAGCTGGTCCATATTAACCATATTGTTTCAACGGAAACAGAGAGAAGTGAAAAGGCTTAAAAGGAAAGAAATCATTAGCCTCATAAGTCATAAC
TGTTGGTTGAGATAATGGTCTGGATCTGACTTCCCTCCACCACCCAAATACCCTGCAACAGTTCCAAGAACATTTGAAACAGTACCACTCAACCA
GGAGGTACTTCGAGTTAATAAGCCTGTCGGTGTCTGCCCCACCTCTTCAAGCATAATTTCTGGGTCTTCTGCCAATAATATGTCAAGCCGCCGCT
TAATCATATAAGCCTTTACAGCTTCAACCCCCTCAACTACGACTTCCTTTGGAGGTATCACAAGAGGATTTTCATCCAACTTAAGCACAGTTAGG
TTGTCAAGCCGGCTAATTGTGTCAGGCAGTTCATGGATCTGGTTGTTGCTCAGATCAAGTTCCTTGAGATTTATCAAGTCACCAATTGTGTCAGG
AAGCTTAGTTAGGTCACTAAAATTGTTGCTCAAGTTGACGATCTCAAGATTTGTCAAGTTCCCAAATGAAAGTGGAAGCCCATGTAGTTCATTAA
AGTGCACATCTAGAAGGCGCAGGGACTTCATCTCACCAAAAGAAGTGGGTAACGAGCGGAGCTTATTAAAAGGAAGTGAAAGCCTTTGCAGATTT
ACCAGTTCAT
GTAGCTGGTCCATATTAACCATATTGTTTCAACGGAAACAGAGAGAAGTGAAAAGGCTTAAAAGGAAAGAAATCATTAGCCTCATAAGTCATAAC
TGTTGGTTGAGATAATGGTCTGGATCTGACTTCCCTCCACCACCCAAATACCCTGCAACAGTTCCAAGAACATTTGAAACAGTACCACTCAACCA
GGAGGTACTTCGAGTTAATAAGCCTGTCGGTGTCTGCCCCACCTCTTCAAGCATAATTTCTGGGTCTTCTGCCAATAATATGTCAAGCCGCCGCT
TAATCATATAAGCCTTTACAGCTTCAACCCCCTCAACTACGACTTCCTTTGGAGGTATCACAAGAGGATTTTCATCCAACTTAAGCACAGTTAGG
TTGTCAAGCCGGCTAATTGTGTCAGGCAGTTCATGGATCTGGTTGTTGCTCAGATCAAGTTCCTTGAGATTTATCAAGTCACCAATTGTGTCAGG
AAGCTTAGTTAGGTCACTAAAATTGTTGCTCAAGTTGACGATCTCAAGATTTGTCAAGTTCCCAAATGAAAGTGGAAGCCCATGTAGTTCATTAA
AGTGCACATCTAGAAGGCGCAGGGACTTCATCTCACCAAAAGAAGTGGGTAACGAGCGGAGCTTATTAAAAGGAAGTGAAAGCCTTTGCAGATTT
ACCAGTTCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544280] | SGN-U600299 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345155 [Download][View] | Facility Assigned ID: TUS66I13_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0065 | Quality Trim Threshold: 14.5 |
Working
