EST details — SGN-E544693
| Search information |
| Request: 544693 | Match: SGN-E544693 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193031 | Clone name: TUS-67-C13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C96887 [cLEY-18-F22] | Trace: SGN-T120424 | EST: SGN-E305184 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193031 [TUS-67-C13] | Trace: SGN-T345567 | EST: SGN-E544692 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544693 | Length: 742 bp (905 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E544693 [] (trimmed)
GCTTCTTCGGAGATGTTAAACAAATGGAAAGAAATCATCTCGAAAGAAGGATCAGAGATAGATGTGTGGCCATATCTTCAAACTTTGACAAGTGA
TGCAATTTCTAGAACTGCATTTGGTAGTAGTTATGAAGAAGGAAAAAAGATTTTTGAACTTCAAAAGGAACAAATGGAACTACTTTTACAAGTAG
CACGTTCATTATACATCCCAGGATGGAGGTACAATTATCTAATAATCACTACTTTGAATTTTTGTAAATGTTCCCTTTTAGGTTACTATTTAAAT
TTTGTCTTTATTTTTAAAAGTCGCCCAAATATAACTCTTAGAAAATTATCCTTTTAGACAACGTTATACACAAGGCTAATGTTTGCTCATATAAG
GACATTATTATGATGTCGTCAAACATTTGCTAATTATAAAATATTTTATCGTGTTTTAACATTTTTTCATAAGATTTTCTGATAGCATCTAAAAA
GGTCTAGAAATTGCAAGAGAAATAAAAAGGTCATTTACAAAGCACTTGTTCATTATGTATCTATGAGATCGAGTATGAAATTTTATTTATTCACT
TTAAATTGAATATCTCATGTTTCACTCCCTTTCCAGCTAGGATTGGAAATCCTGTATGTTACATATCCAATTGAGTCCTCGGACTTTCGAAATAG
TGAAGAAGAAAGTATGAATCTTTCGCCTGATTTTGTAGTCCATCATAAATGTTATTTTTCTAAAGCAGGTCAAAAAA
TGCAATTTCTAGAACTGCATTTGGTAGTAGTTATGAAGAAGGAAAAAAGATTTTTGAACTTCAAAAGGAACAAATGGAACTACTTTTACAAGTAG
CACGTTCATTATACATCCCAGGATGGAGGTACAATTATCTAATAATCACTACTTTGAATTTTTGTAAATGTTCCCTTTTAGGTTACTATTTAAAT
TTTGTCTTTATTTTTAAAAGTCGCCCAAATATAACTCTTAGAAAATTATCCTTTTAGACAACGTTATACACAAGGCTAATGTTTGCTCATATAAG
GACATTATTATGATGTCGTCAAACATTTGCTAATTATAAAATATTTTATCGTGTTTTAACATTTTTTCATAAGATTTTCTGATAGCATCTAAAAA
GGTCTAGAAATTGCAAGAGAAATAAAAAGGTCATTTACAAAGCACTTGTTCATTATGTATCTATGAGATCGAGTATGAAATTTTATTTATTCACT
TTAAATTGAATATCTCATGTTTCACTCCCTTTCCAGCTAGGATTGGAAATCCTGTATGTTACATATCCAATTGAGTCCTCGGACTTTCGAAATAG
TGAAGAAGAAAGTATGAATCTTTCGCCTGATTTTGTAGTCCATCATAAATGTTATTTTTCTAAAGCAGGTCAAAAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544693] | SGN-U591241 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345568 [Download][View] | Facility Assigned ID: TUS67C13_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.933 | Expected Error Rate: 0.0121 | Quality Trim Threshold: 14.5 |
Working
