EST details — SGN-E545542
Search information |
Request: 545542 | Match: SGN-E545542 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C193525 | Clone name: TUS-68-H3 |
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Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C99369 [cLEZ-17-E1] | Trace: SGN-T123406 | EST: SGN-E310981 | Direction: 5' | Facility: TIGR |
Clone: SGN-C193525 [TUS-68-H3] | Trace: SGN-T346416 | EST: SGN-E545541 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E545542 | Length: 550 bp (917 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E545542 [] (trimmed)
GCAAAATTTGAACCTACAAAAATTTTCTCCATTTTTATAGCAAATTTCTTCCATAAATGGCTGGTAGAGGCAAAACCCTAGGTTCAGGAACAGCA
AAAAAGGCTACTTCTCGTAGTAGCAAAGCTGGTCTTCAGTTTCCGGTTGGTCGTATTGCTCGGTTTTTGAAAGCCGGGAAGTATGCTGAACGTGT
CGGTGCCGGAGCTCCGGTTTATCTAGCTGCTGTTCTGGAGTACCTTGCTGCTGAGGTTCTTGAGTTAGCTGGAAATGCAGCAAGGGACAACAAGA
AGACTAGGATCGTTCCGAGGCATATTCAATTGGCAGTGAGGAACGATGAGGAACTAAGCAAACTTCTCGGAGATGTAACGATTGCCAATGGCGGT
GTGATGCCCAACATTCACAACCTTCTGCTTCCAAAGAAAACCGGTGGTTCAAAGCCATCTGCTGATGAAGATTAAACATATTCAAGACTTGGTTT
TTCTTAGTTTATAGCTCTTTGTTCTTTTTCTGGAATAGTATTAAGGATTTGCTAGTGTTTCTTTAGGTGTTTAGT
AAAAAGGCTACTTCTCGTAGTAGCAAAGCTGGTCTTCAGTTTCCGGTTGGTCGTATTGCTCGGTTTTTGAAAGCCGGGAAGTATGCTGAACGTGT
CGGTGCCGGAGCTCCGGTTTATCTAGCTGCTGTTCTGGAGTACCTTGCTGCTGAGGTTCTTGAGTTAGCTGGAAATGCAGCAAGGGACAACAAGA
AGACTAGGATCGTTCCGAGGCATATTCAATTGGCAGTGAGGAACGATGAGGAACTAAGCAAACTTCTCGGAGATGTAACGATTGCCAATGGCGGT
GTGATGCCCAACATTCACAACCTTCTGCTTCCAAAGAAAACCGGTGGTTCAAAGCCATCTGCTGATGAAGATTAAACATATTCAAGACTTGGTTT
TTCTTAGTTTATAGCTCTTTGTTCTTTTTCTGGAATAGTATTAAGGATTTGCTAGTGTTTCTTTAGGTGTTTAGT
Unigenes |
Current Unigene builds | |||||
[SGN-E545542] | SGN-U577216 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T346417 [Download][View] | Facility Assigned ID: TUS68H03_Q1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.976 | Expected Error Rate: 0.0007 | Quality Trim Threshold: 12.5 |