EST details — SGN-E545565
Search information |
Request: 545565 | Match: SGN-E545565 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C193539 | Clone name: TUS-68-H17 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C99465 [cLEZ-17-L11] | Trace: SGN-T123467 | EST: SGN-E311042 | Direction: 5' | Facility: TIGR |
Sequence |
Sequence Id: SGN-E545565 | Length: 532 bp (895 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E545565 [] (trimmed)
GCGGAAGAAAGGATGTTTAATAAGCATCTTAAATGGCTTACATAAGATGGGCCAAGCATATAAATGAACACTTAACTGAAATAAATTTAATCTCT
ATGATACTGTCGGAAACAGATTTTCTAGTTTATCTTTAGAATGTGAAAAAACAAAGATTACAGTTATTATTTTCTGCATCCAAAACAGATTGTCA
GAGATGCATCAACCCGCCAAGACTACCATAAACCTCAAGCAACTTTGTGCTGTTCCATTAATTGTGTTCAAGTACCATGATACAGCTCGCAGCAA
GCCCGCACATTAACTGTCAAGTGAGAAGTCAATCGAGTTCCAGCCACCACATTATGCAGAGGCAAAAATGACTGAGTACACCCCAAAGCTCCCAA
TGTCCTGGGACTGGTGAATGAGAAGCGGCGCGTGTTGGAACGAGTGCCGGAGATCGGAGGAGTGCGAACGCGGTTAACGGTCGGAGATGAACGGG
AAGTGGAAGCTCTAGCGACGGAAGTGAGTGATCTGGTGACGGAACCACGCCAAGCCC
ATGATACTGTCGGAAACAGATTTTCTAGTTTATCTTTAGAATGTGAAAAAACAAAGATTACAGTTATTATTTTCTGCATCCAAAACAGATTGTCA
GAGATGCATCAACCCGCCAAGACTACCATAAACCTCAAGCAACTTTGTGCTGTTCCATTAATTGTGTTCAAGTACCATGATACAGCTCGCAGCAA
GCCCGCACATTAACTGTCAAGTGAGAAGTCAATCGAGTTCCAGCCACCACATTATGCAGAGGCAAAAATGACTGAGTACACCCCAAAGCTCCCAA
TGTCCTGGGACTGGTGAATGAGAAGCGGCGCGTGTTGGAACGAGTGCCGGAGATCGGAGGAGTGCGAACGCGGTTAACGGTCGGAGATGAACGGG
AAGTGGAAGCTCTAGCGACGGAAGTGAGTGATCTGGTGACGGAACCACGCCAAGCCC
Unigenes |
Current Unigene builds | |||||
[SGN-E545565] | SGN-U566437 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T346440 [Download][View] | Facility Assigned ID: TUS68H17_P1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.981 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |