EST details — SGN-E545720
| Search information |
| Request: 545720 | Match: SGN-E545720 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193629 | Clone name: TUS-68-L11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C100060 [cLEZ-20-F10] | Trace: SGN-T123999 | EST: SGN-E312531 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193629 [TUS-68-L11] | Trace: SGN-T346594 | EST: SGN-E545719 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E545720 | Length: 572 bp (866 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E545720 [] (trimmed)
GATTCGAACTAATATACACCGAAGACGACTCTCCACCAGATCAGTTTGAGTATGCAGTGACACAACCCGCGCTAGGAGGAATATTAAAGGATCTC
AAGCCAGCTTATGGCGATATTCCAATATATATTCACGAAAATGGCCAAATGACAAGACTAAAAGGCACGTTAGATGATACAAGAAGGGTGGAATA
TCTGCAAGCTTACATTGGGAATGTGCTTGAAGCTATGAGGAATGGATCCAACGTGAAAGGGTATTTCGTGTGGTCGTTCTTAGACTGTATTGAGT
TACTGGATGCATATGGTTCAGGATTTGGCTTATACTATGTGGATTTGGATGACACAGAGTTAACAAGATATCCAAAGCTTTCATCACATTGGATA
CACTAATTTCTTGAAGGGGAAAGACTCCCAACATAGTGAAATTCGTCAGATTGAAGATAAAGTACTTCATTCTTCACAATAGGTATTTTGTGGTT
TCACTTGTATCTTCACGATAATGATGTATTATTTCCTAAGTTTGGGGTGGACTTTTCACTTTCAATGCTGCATTCGTGTCGAGGTCTATAAGATG
CA
AAGCCAGCTTATGGCGATATTCCAATATATATTCACGAAAATGGCCAAATGACAAGACTAAAAGGCACGTTAGATGATACAAGAAGGGTGGAATA
TCTGCAAGCTTACATTGGGAATGTGCTTGAAGCTATGAGGAATGGATCCAACGTGAAAGGGTATTTCGTGTGGTCGTTCTTAGACTGTATTGAGT
TACTGGATGCATATGGTTCAGGATTTGGCTTATACTATGTGGATTTGGATGACACAGAGTTAACAAGATATCCAAAGCTTTCATCACATTGGATA
CACTAATTTCTTGAAGGGGAAAGACTCCCAACATAGTGAAATTCGTCAGATTGAAGATAAAGTACTTCATTCTTCACAATAGGTATTTTGTGGTT
TCACTTGTATCTTCACGATAATGATGTATTATTTCCTAAGTTTGGGGTGGACTTTTCACTTTCAATGCTGCATTCGTGTCGAGGTCTATAAGATG
CA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E545720] | SGN-U583154 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T346595 [Download][View] | Facility Assigned ID: TUS68L11_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0377 | Quality Trim Threshold: 12.5 |
Working
