EST details — SGN-E545940
| Search information |
| Request: 545940 | Match: SGN-E545940 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193757 | Clone name: TUS-69-A19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C100965 [cLHT-11-I19] | Trace: SGN-T171363 | EST: SGN-E359161 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193757 [TUS-69-A19] | Trace: SGN-T346814 | EST: SGN-E545939 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E545940 | Length: 791 bp (869 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E545940 [] (trimmed)
GATTTTTGATTTCTTATCTACCAACTTAATTAGTTTTGAACATTTTTAGTGCAGAAATGGGTTACGTAAAACTTGTTTTTTTAATGCTATTTTCC
TTACTCTGTCAACTTGCTTTCTGCTCGTCCTCATCTCATTTGTGCCCCAAAGATCAAGCTCTTGCTCTTCTACAATTCAAGCAAATGTTTAAAAT
AAGTCGTTATGTTTCCGGTAACTGTTTCGACGTAAAAGGCCAACCGATTCAGTCATATCCGCAAACTCTTTCGTGGAACAAGAGCACAGATTGTT
GCTCTTGGGATGGAGTTTATTGTGACGAGACGACTGGAAAAGTGATTGAGCTTAACCTCACTTGCAGCAAACTTCAAGGCAAATTTCACTCAAAC
AGTAGTGTCTTTCAACTCTCCAATCTCAAAAGGCTTGATTTGTCTAATAATAATTTCTCTGGATCGTACATTTCGCCTAAATTTGGTGAGTTTTC
TAGTTTGACGCATCTTCATTTGTCGTATTCGAGTTTTATAGGTCGAATCCCAGTAGAAATCTCTCGTCTTTCGGAATTACAAGTTCTTCATATCC
GGGGTTATTCGTATGAGCTTAGATTCGAACCTCACAATTTTGAACTGCTCCTTAAGAACTTGACCCGATTAAGAGAGCTCCACCTTAGCGATGTA
AACATCTCTTCCGCTATTCCTCTGAAATTCTCTTCTCATTTAACAAATCTAAGACTTCGGAACACGCAGTTATACGGGATGCTGCCGGAAAGTGT
TTTTCACTTTTCCACTTAGAATCTCTTTATT
TTACTCTGTCAACTTGCTTTCTGCTCGTCCTCATCTCATTTGTGCCCCAAAGATCAAGCTCTTGCTCTTCTACAATTCAAGCAAATGTTTAAAAT
AAGTCGTTATGTTTCCGGTAACTGTTTCGACGTAAAAGGCCAACCGATTCAGTCATATCCGCAAACTCTTTCGTGGAACAAGAGCACAGATTGTT
GCTCTTGGGATGGAGTTTATTGTGACGAGACGACTGGAAAAGTGATTGAGCTTAACCTCACTTGCAGCAAACTTCAAGGCAAATTTCACTCAAAC
AGTAGTGTCTTTCAACTCTCCAATCTCAAAAGGCTTGATTTGTCTAATAATAATTTCTCTGGATCGTACATTTCGCCTAAATTTGGTGAGTTTTC
TAGTTTGACGCATCTTCATTTGTCGTATTCGAGTTTTATAGGTCGAATCCCAGTAGAAATCTCTCGTCTTTCGGAATTACAAGTTCTTCATATCC
GGGGTTATTCGTATGAGCTTAGATTCGAACCTCACAATTTTGAACTGCTCCTTAAGAACTTGACCCGATTAAGAGAGCTCCACCTTAGCGATGTA
AACATCTCTTCCGCTATTCCTCTGAAATTCTCTTCTCATTTAACAAATCTAAGACTTCGGAACACGCAGTTATACGGGATGCTGCCGGAAAGTGT
TTTTCACTTTTCCACTTAGAATCTCTTTATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E545940] | SGN-U582500 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T346815 [Download][View] | Facility Assigned ID: TUS69A19_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0036 | Quality Trim Threshold: 14.5 |
Working
