EST details — SGN-E546210
| Search information |
| Request: 546210 | Match: SGN-E546210 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193914 | Clone name: TUS-69-H8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C101844 [cLHT-22-D8] | Trace: SGN-T171062 | EST: SGN-E358577 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E546210 | Length: 808 bp (892 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E546210 [] (trimmed)
GTTTTGTAGTGGACAATGGAAACAAAATTTCCACATGCTGTTTGGGCTGCAGGTCGGAGTTTAATTGCTCTTCTTTTACCGAACTTTGATGTTGT
GGATAATCTGTGGCTTGAGCCTTTCTCTTGGGAGGGAATTGGGTGTACAAAGATCACCAAAGCTAAAAATGATTCTATCAGCGGGAATGTTGAAT
CAAGATCATACCTGGAGAAGAGACTAGTTTTTTGCTTTGGTTCTTATGTTGCAGCCCAGCTATTGCTTCCATTTGGGGAAGAAAACATTCTTTCT
TCTTCAGAGCTGAAGCAGGCTGAAGAGATAGCTACAAGGATGGTGATTCAGTATGGTTGGGGCCCTGATGATAGTCCTACAATTTACCATCATGG
CAATTCGGTCACGACTTTGAGTATGGGAAACCATTTTGAATATGAGATGGCTGCAAAAGTGGAAAAGATTCATATTCGATCCTAACTTGTTTGGG
ATCGAGGCTTAGTTGTTGTTGGCGGTCATTTTGTTTTCAATCTAGGGCCAATGTTTTATTTCCTCCAACAAAGTGATAGTTGTAAAACATTGGAT
AGCCACGAAGCTCAAGAACCATCTAAAATGGCGTAGAATCTTAGTTGACGGTAATGGTCGGAAAGTTCCCAATGAGGTTATCATTGAAAGAGTTG
TTCTATATTTCATACCAATATGGGTAGAGAGAAAAAACAGGGTTTGAAATGGTATCGACGACAACCAGAGAAGTCGCTAGAGTTCCTACAGACCG
TTTTTTCATCATCTCTTAATATCCACCCGACACAATCAAACTCTGCTG
GGATAATCTGTGGCTTGAGCCTTTCTCTTGGGAGGGAATTGGGTGTACAAAGATCACCAAAGCTAAAAATGATTCTATCAGCGGGAATGTTGAAT
CAAGATCATACCTGGAGAAGAGACTAGTTTTTTGCTTTGGTTCTTATGTTGCAGCCCAGCTATTGCTTCCATTTGGGGAAGAAAACATTCTTTCT
TCTTCAGAGCTGAAGCAGGCTGAAGAGATAGCTACAAGGATGGTGATTCAGTATGGTTGGGGCCCTGATGATAGTCCTACAATTTACCATCATGG
CAATTCGGTCACGACTTTGAGTATGGGAAACCATTTTGAATATGAGATGGCTGCAAAAGTGGAAAAGATTCATATTCGATCCTAACTTGTTTGGG
ATCGAGGCTTAGTTGTTGTTGGCGGTCATTTTGTTTTCAATCTAGGGCCAATGTTTTATTTCCTCCAACAAAGTGATAGTTGTAAAACATTGGAT
AGCCACGAAGCTCAAGAACCATCTAAAATGGCGTAGAATCTTAGTTGACGGTAATGGTCGGAAAGTTCCCAATGAGGTTATCATTGAAAGAGTTG
TTCTATATTTCATACCAATATGGGTAGAGAGAAAAAACAGGGTTTGAAATGGTATCGACGACAACCAGAGAAGTCGCTAGAGTTCCTACAGACCG
TTTTTTCATCATCTCTTAATATCCACCCGACACAATCAAACTCTGCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546210] | SGN-U595056 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347085 [Download][View] | Facility Assigned ID: TUS69H08_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0089 | Quality Trim Threshold: 14.5 |
Working
