EST details — SGN-E546596
| Search information |
| Request: 546596 | Match: SGN-E546596 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194139 | Clone name: TUS-70-A17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C102863 [cLHT-31-O5] | Trace: SGN-T171797 | EST: SGN-E359411 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194139 [TUS-70-A17] | Trace: SGN-T347470 | EST: SGN-E546595 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546596 | Length: 675 bp (915 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E546596 [] (trimmed)
GCGCGCTCAAAAAGGGAAACGGATCGTTGTTCTTCTTGAATTCATAATCCCATTCACCTGGGAACTAGTTTTCTGCTATGTTCTTCGATTCTTCA
CACTCAAAAACCCTAATTTGTTGAAGTTTTTGTACTAATTTATCATACAGAAAAACCCTAATTTTGCAGAAACAATTCCATATGGATGCGAAGGA
CATATTAGGATTGCCTAAAAATGGACCTTTAATGTCCCAAGAGAAGAAATCGAGGCCTCAGAAAGAGTCTCAAAGGAAACCTGACGGCATTTCGC
GAGAAGTTTATGCACTTACAGGTGGTATTGCACCTCTTATGCCTTCTATTGATATAAATCAGCTGAAAAAGCGAGCTCTTTCGGAGTCCGAAAAG
ATTACGTGGCAATGGCTTCCATTCACAAGTTCTGCTAGAAAAGATAACTTACAGCTTTATCATTGGGTCAGAGTTGTTAATGGTGTTCCGCCTAC
AGGTGACTATTCGTTTGCAAAGTATAATAAGTCGGTGGATGTGATCGAGTACACAGATGAGGAGTATGAGAAGTTCTTGTCCAATCCTTCATGGA
CGAAGGAAGAGACGGATCAATTATTTGACCTGTGCAAGAGGTTTGATCTCCGTTTCGTTATCATAGCTGATAGGTTCCCTTCAAATCGTACAATT
GAGGAACTGA
CACTCAAAAACCCTAATTTGTTGAAGTTTTTGTACTAATTTATCATACAGAAAAACCCTAATTTTGCAGAAACAATTCCATATGGATGCGAAGGA
CATATTAGGATTGCCTAAAAATGGACCTTTAATGTCCCAAGAGAAGAAATCGAGGCCTCAGAAAGAGTCTCAAAGGAAACCTGACGGCATTTCGC
GAGAAGTTTATGCACTTACAGGTGGTATTGCACCTCTTATGCCTTCTATTGATATAAATCAGCTGAAAAAGCGAGCTCTTTCGGAGTCCGAAAAG
ATTACGTGGCAATGGCTTCCATTCACAAGTTCTGCTAGAAAAGATAACTTACAGCTTTATCATTGGGTCAGAGTTGTTAATGGTGTTCCGCCTAC
AGGTGACTATTCGTTTGCAAAGTATAATAAGTCGGTGGATGTGATCGAGTACACAGATGAGGAGTATGAGAAGTTCTTGTCCAATCCTTCATGGA
CGAAGGAAGAGACGGATCAATTATTTGACCTGTGCAAGAGGTTTGATCTCCGTTTCGTTATCATAGCTGATAGGTTCCCTTCAAATCGTACAATT
GAGGAACTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546596] | SGN-U585710 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347471 [Download][View] | Facility Assigned ID: TUS70A17_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.988 | Expected Error Rate: 0.0090 | Quality Trim Threshold: 14.5 |
Working
