EST details — SGN-E546606
| Search information |
| Request: 546606 | Match: SGN-E546606 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194145 | Clone name: TUS-70-A23 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C102853 [cLHT-31-O17] | Trace: SGN-T171667 | EST: SGN-E359281 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194145 [TUS-70-A23] | Trace: SGN-T350274 | EST: SGN-E549399 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546606 | Length: 623 bp (900 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E546606 [] (trimmed)
CCCCATCAAAAATTTCCCTTTAAAAAAAAAAATTTTTTTGGGGATCCCAAAAAAACCCCAGGGGGGGGCCCCTTTCCAAACCCCCCCTGATTTTC
CCCTTTCCCCCCTTTTTTTTTTTTTTTGGCCCCCTGGATTTTTTTTTTTTCCCCCCCCCCCCCCAAATTGCCAATTTTTCAAACCCGTTTTTTTG
ATCCCCCCCAAAAACAACCCCTTTTTCCTTAAATTTTTCCCCCACCCAAACCCCCAAGGTGATGGCCCCTTTGGGGGGGGAACCCCCTATTTTCC
CCCCAAAAAATTTCCGGGGGGAAATTTTTAGCCCCCCCCCGAACCCCGAAAAACCCCAAACCCCCCCCCATTTACCCCTTTTCCCCCGAAAAAAC
CCCGCCCCCCGGTAAAAAACCCCCCCCAAAACCCCCTTTTTCCCCCGAAATTTCCCCCCCCTGGGGCCCCCCCCCTAAAAACTTATACCCCCCCC
AAAAATTTTTTTCCCCCCCCCCGGCGGGAAATTTTTTCCCCCGGCCCCCCCCAAATTTCCCCCCCCGTTTTCCAAAAACCCCCCCCCGGGGTTTC
CCCATTTTGTTTCCAAATCTCCCGGTTTTTTTTTCGGGGGGTTCCCCCCTGGG
CCCTTTCCCCCCTTTTTTTTTTTTTTTGGCCCCCTGGATTTTTTTTTTTTCCCCCCCCCCCCCCAAATTGCCAATTTTTCAAACCCGTTTTTTTG
ATCCCCCCCAAAAACAACCCCTTTTTCCTTAAATTTTTCCCCCACCCAAACCCCCAAGGTGATGGCCCCTTTGGGGGGGGAACCCCCTATTTTCC
CCCCAAAAAATTTCCGGGGGGAAATTTTTAGCCCCCCCCCGAACCCCGAAAAACCCCAAACCCCCCCCCATTTACCCCTTTTCCCCCGAAAAAAC
CCCGCCCCCCGGTAAAAAACCCCCCCCAAAACCCCCTTTTTCCCCCGAAATTTCCCCCCCCTGGGGCCCCCCCCCTAAAAACTTATACCCCCCCC
AAAAATTTTTTTCCCCCCCCCCGGCGGGAAATTTTTTCCCCCGGCCCCCCCCAAATTTCCCCCCCCGTTTTCCAAAAACCCCCCCCCGGGGTTTC
CCCATTTTGTTTCCAAATCTCCCGGTTTTTTTTTCGGGGGGTTCCCCCCTGGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546606] | SGN-U602598 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347481 [Download][View] | Facility Assigned ID: TUS70A23_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.733 | Expected Error Rate: 0.0278 | Quality Trim Threshold: 14.5 |
Working
