EST details — SGN-E547159
Search information |
Request: 547159 | Match: SGN-E547159 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C194467 | Clone name: TUS-70-O9 |
| ||
Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C108250 [cLPP-8-F20] | Trace: SGN-T172268 | EST: SGN-E360392 | Direction: 5' | Facility: TIGR |
Clone: SGN-C194467 [TUS-70-O9] | Trace: SGN-T348035 | EST: SGN-E547160 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E547159 | Length: 786 bp (896 bp untrimmed) |
Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E547159 [] (trimmed)
GAGGAAACAAATGGTAAACCAAATGAATAACTTAAGCTCTAAAACGAGTGTGTGTGCTTCATATATAAACAATAAAAAGGTCAAAAAGAAGGGAT
TCTAAATACCCAAAAAAAGCCAATGGCACACTAGGTTATGAAGGTAACGCGGCACGCGCGGCGTTTCTTCCTAAGCCAACACCCAAACCCACAGG
TACAGAATCAGTTTTGCTCTTCACATTATGACTACAATGGGCAGAATGAACATGGGCCTGGTGTGAGTTCTGGTTATTGTTGCTTATATTGATAA
CATGATGGCCATTTCCATTGATCTGATGAGAATGGCCGGTGCCGTTTTGCATACTTGAACTGTGAGGAATCTGCATCATTCCAATCCCTTCGGAC
TCAACCGATTCTTCAACACACTCAATGTCTTCATTGTAACCATTTATCAAGAAGTCTGAACAGTTCTTCTTACACCCATGATCATATGGATTACG
GAATCGACCACCTGGTCCTCTGAGGTAACTGTAACGCATCATATTGGCCATTTCATTTGTTGTAATGTTGTGTGATATCTGAGAAGCTTGTACCC
CAGTTAAGACTGCCACTCCAACGAAGAGGAAGAAGTCTGCAAATAAAAATGCTAAAGCACCAACATGGTGAGTACCGGCATGACTCAGCCAAGCC
CCAAACCATGATGGAGCTGCTGGGTCAGTCAAGACTCTTGTAAGAGTAACTGCACCAGTTAAGACCATTGCCAATACTTCCAGAACAAGAAAGAT
GAAAAAGTCCCACTTGTTTTTCTTGC
TCTAAATACCCAAAAAAAGCCAATGGCACACTAGGTTATGAAGGTAACGCGGCACGCGCGGCGTTTCTTCCTAAGCCAACACCCAAACCCACAGG
TACAGAATCAGTTTTGCTCTTCACATTATGACTACAATGGGCAGAATGAACATGGGCCTGGTGTGAGTTCTGGTTATTGTTGCTTATATTGATAA
CATGATGGCCATTTCCATTGATCTGATGAGAATGGCCGGTGCCGTTTTGCATACTTGAACTGTGAGGAATCTGCATCATTCCAATCCCTTCGGAC
TCAACCGATTCTTCAACACACTCAATGTCTTCATTGTAACCATTTATCAAGAAGTCTGAACAGTTCTTCTTACACCCATGATCATATGGATTACG
GAATCGACCACCTGGTCCTCTGAGGTAACTGTAACGCATCATATTGGCCATTTCATTTGTTGTAATGTTGTGTGATATCTGAGAAGCTTGTACCC
CAGTTAAGACTGCCACTCCAACGAAGAGGAAGAAGTCTGCAAATAAAAATGCTAAAGCACCAACATGGTGAGTACCGGCATGACTCAGCCAAGCC
CCAAACCATGATGGAGCTGCTGGGTCAGTCAAGACTCTTGTAAGAGTAACTGCACCAGTTAAGACCATTGCCAATACTTCCAGAACAAGAAAGAT
GAAAAAGTCCCACTTGTTTTTCTTGC
Unigenes |
Current Unigene builds | |||||
[SGN-E547159] | SGN-U583683 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T348034 [Download][View] | Facility Assigned ID: TUS70O09_P1 |
Submitter: Koni | Sequencing Facility: INRA (MWG) |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0061 | Quality Trim Threshold: 14.5 |