EST details — SGN-E547245

Search information 
Request: 547245Match: SGN-E547245
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194517Clone name: TUS-71-A11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C108608 [cLPP-9-J4] Trace: SGN-T172706 EST: SGN-E360043 Direction: 5' Facility: TIGR
Clone: SGN-C194517 [TUS-71-A11] Trace: SGN-T348121 EST: SGN-E547246 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E547245Length: 807 bp (898 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E547245 [] (trimmed) ATATAACCAATTTGTTTATTCGATTGTAAATTGTTCTACTAGTTTATCTGTTTACTTTCTTGAATAATAACGCGGACCAAATAGAGATTCAGTCT
TAGAAAATAAGACTTGTGCTAACCATAAGCAGTGCAGCTATAACATTGAACATGCTTCACTCGCAGGGAAGCAATAATGAAGGCACTAAGAATAA
CAGAGGTACAAGCTACAAGTGTATTTTTTTTCCACCCCCAGTCTAGGAGGATTATTAGTACTTCCATGTACCATCCACATGACTCGAACACCCAA
CCTACCTGTTGGAAATGAAGGTGCTGTACAAGCTAAGCAAGCTTCATGGTCAATTATAAACTCTCTTCATAATTGCTAGTATTGACAGGAAACAT
CTAAACAAAAACAAAAGCACAACGGTAGAACTAAGCAACTATCTACCTTGTGGATTTACAATTTGTGAGAAGACAGTGTCCGTGCTGTCCTCTGC
TGACTCCTTACCTTCTTCTGCAACCGTTAACAACTCTTTATGCATAGCATAGGCATCATTAGCTTTCTGTTCCGCCACCATTTTTGGTTCATCGG
GATCACTTTGCAACTGAAGGCAGTACTCAAGATTCCACAGCACTGAACCCATTGAAGGACGATCAGTTCCGTGATCAGACAAACAACTCACTGCT
GTATCGATGAATTGCTTCAGACATTCTTCTATAATCTCCCCTTTAATATGTGGATCCATAAGTTCCTTGGTAGTATTTTTCCTATGGCAGTGTAA
TGCCCAATCTGCTAGACTGACTTGTTCCCTTTGGAGACTAGCATTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E547245] SGN-U603307 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T348120 [Download][View] Facility Assigned ID: TUS71A11_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0023 Quality Trim Threshold: 14.5