EST details — SGN-E547604

Search information 
Request: 547604Match: SGN-E547604
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194726Clone name: TUS-71-J4
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C104890 [cLPP-16-G13] Trace: SGN-T176321 EST: SGN-E363939 Direction: 5' Facility: TIGR
Clone: SGN-C194726 [TUS-71-J4] Trace: SGN-T350438 EST: SGN-E549563 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E547604Length: 805 bp (886 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E547604 [] (trimmed) AAGAGCAAAACCGATTATATTATAAGAATAAACATAAATGGTTGGATTGTTATATGTAATGTAATTATGGTACATGATGTATTAGTTGAAGAAAT
AGCATAGGAAAGAGATAAGTGAGAGGAATAATGTAAAAGCAGTTGTAGATGCTGATGAAATATTATGAGCTCCCACTGTATACACATTTTCAGAG
CTATCATCTTTCACCTTAATATTGGAAGAACAGTCATATTGAGTCCACCCAAGCGTCTTTTTTTCAAGATCATACACAAAAAGCTTGTTTGATAG
CACAAGATCTCCTAACAGAAAAAGATCATCTCCATCCTTTCCCTCGATTCCCTCTTGCCAACCGATGCACCAGTCACCGTCATGAAGTTTGAAAA
GATAATCGTGGGGATAGGCCGTCAAAGTAAGATTTCCCATAAACTTAAATGATACAGCGGGGAAATCATTGTCAACATTTCCGCTGTATGAAAAG
CACTCAAAGTTCCCTTCATGATGATGAGTCTTCAATTTTGGTTGCTTTGCCATAAGCTTTCCCATGACAGCATTATAGACATTGCTTGGAAGATA
TGCTAAAGTTGTTCCACTGTCAATTATTGCTGCTTCACTATACTTCGACTCAAATATGGAAGTCGGAATGTTTAGAACTTCACCGTCAACCTCAA
TATTCTTGAGAGAAACAGTATAATGTTGCCGATTTGTGAGTAATGGGGTTGAATTTACTTTTGGTTCAACTAGTTGTCCAATAGCAAATATACCA
CCTCCACTATTTTCATTGAGGCAATGTGAAAATACTCTTTTGACA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E547604] SGN-U604330 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T348479 [Download][View] Facility Assigned ID: TUS71J04_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.956 Expected Error Rate: 0.0017 Quality Trim Threshold: 14.5