EST details — SGN-E547736
| Search information |
| Request: 547736 | Match: SGN-E547736 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194803 | Clone name: TUS-71-M9 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C105475 [cLPP-18-E3] | Trace: SGN-T177234 | EST: SGN-E364593 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194803 [TUS-71-M9] | Trace: SGN-T348612 | EST: SGN-E547737 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547736 | Length: 787 bp (884 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E547736 [] (trimmed)
CTTAGATTAGTTATTATTATCATGTATAAACTGACAATCTTTTACAAGACATTACAAGGTAATAACAAAAATGTTTTGCTAGTCAAAAACAACTA
CACCTATGTTGTTTTTTTATCTAGACATATCTTGATCTTCTCTTTTCTTTGAAACAAGAAAAAACAAAATACAAATACTTAGCTTATTCTCTTAC
AAAATCAGGCTTAGCTTAGCTTATCTCATACAAAATCCAAACAAACAAAACAAACTGAAAACTAAGAAATTAAAAAAAAAGACATTATTTTTTCT
TGTGCAAGCACCTTTTGATGATGGAAGTTGAAACATGTATGGTGCCTTCTCCCTTGTTCCCTTCAACTCAATGCACATTTATTTTAAACCTTAAA
AAGAAATTTTTAGAGAAAATAATCACCCTAAAGCTCACATGTCATTCCAACTTTGAGCATTCGTTTCGTTGGGATATCGAATACTTTGTTACTAC
TCTGTCTTAAGTTCCTCTTGAGGAAATTGTATGCATAGTTGATCACCATTCTTTTGGTTACACCAGACCCCTTGCACGCGACGACGTCTTGTTCT
CCAACCAAATGAACCACTCCCATGTTGGAAGCTCTCTCAAGTACTTCGACGTCTTTCTCAATCAAGGAGGCAGTTTCTCCTTGATTGTCTCCATT
TGCTGCAACTGAGAACATGTAATCTTCCTTGATGTAGTTCTTTAGCCTTTCTACCAATAACTTCTCAATAGGCTCTTCCTCATTGCGCATTTCAT
TGTATCCATAACGTATCACACAACGGA
CACCTATGTTGTTTTTTTATCTAGACATATCTTGATCTTCTCTTTTCTTTGAAACAAGAAAAAACAAAATACAAATACTTAGCTTATTCTCTTAC
AAAATCAGGCTTAGCTTAGCTTATCTCATACAAAATCCAAACAAACAAAACAAACTGAAAACTAAGAAATTAAAAAAAAAGACATTATTTTTTCT
TGTGCAAGCACCTTTTGATGATGGAAGTTGAAACATGTATGGTGCCTTCTCCCTTGTTCCCTTCAACTCAATGCACATTTATTTTAAACCTTAAA
AAGAAATTTTTAGAGAAAATAATCACCCTAAAGCTCACATGTCATTCCAACTTTGAGCATTCGTTTCGTTGGGATATCGAATACTTTGTTACTAC
TCTGTCTTAAGTTCCTCTTGAGGAAATTGTATGCATAGTTGATCACCATTCTTTTGGTTACACCAGACCCCTTGCACGCGACGACGTCTTGTTCT
CCAACCAAATGAACCACTCCCATGTTGGAAGCTCTCTCAAGTACTTCGACGTCTTTCTCAATCAAGGAGGCAGTTTCTCCTTGATTGTCTCCATT
TGCTGCAACTGAGAACATGTAATCTTCCTTGATGTAGTTCTTTAGCCTTTCTACCAATAACTTCTCAATAGGCTCTTCCTCATTGCGCATTTCAT
TGTATCCATAACGTATCACACAACGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547736] | SGN-U574524 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348611 [Download][View] | Facility Assigned ID: TUS71M09_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.939 | Expected Error Rate: 0.0022 | Quality Trim Threshold: 14.5 |
Working
