EST details — SGN-E548045

Search information 
Request: 548045Match: SGN-E548045
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C189333Clone name: TUS-57-I11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C64855 [cLEM-7-H9] Trace: SGN-T84766 EST: SGN-E269968 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E548045Length: 842 bp (902 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548045 [] (trimmed) AAGACAAACAAACTATTACTTCATTATATATAGAAAAAAAAAACATAGCGGCAAGGAGTACAAATCTGAATATATGGAACCTGGTAAAAAAATAG
GACATTGATAATCCTATCAAAAAACTAGGGACTGGTTAAAAAAACAACCTATATAAGGTTGTAATGGCCAAGCCCCTGGGAATAACAGGCACCAC
AACAACAGAAATTTGCTCAAAGCAACTAAAGACTAAAAGACACATAATAGAATACTTACAGTGAAAACACTAAAGACTCTTGAACATGAAAAAAA
ACTACACAACTAGTGTCTGATTCCTGCAATGTAGCTAAGCACAAAAGAGGCAAATGCGCGATGAATCTTGTCTATCGCAGTTTTAGCTGAATGAT
TCAAACCGCCTGGCTCTCGAGGAGCAGCATGAGTGAAAATTTTAATCTCAGTACTAGGTGACTGTATTCTCAGGAGACCATGGCATGATGGAGGT
AAGTCTCCAAAAATGGCTGAAACAGGGTTTCGATTTGACGAAGCCCTGCAAAAAATGGTGGGAAAAAGATGTATGCCATAGCGTCCTGGAAAACA
ACCGAGACACTGAAGTATTAGATAGCCACGAATATATACGGGCTAAAAAAAGAACACTCATGTTTGCTTCTGTAATTGCCAGGCTGAATGAACCA
ATTTAGCTTTCTGCTTATTCGTTTTGACCATTTCGAATGCATTTCCTTGTGCCCTTTGTGGTTTTTAAGGAGAGGATGTCACACCTCCACAAAGC
CTCCACAAGAAGCTCGACTGAGCTGCAACTAACGGAGCAATGCTGGAGATTTCAGCCGAGTAGATTCTCTCCTAACTTTTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548045] SGN-U581531 Tomato 200607 Build 2 51 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T348920 [Download][View] Facility Assigned ID: TUS57I11_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0030 Quality Trim Threshold: 14.5