EST details — SGN-E548504

Search information 
Request: 548504Match: SGN-E548504
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190978Clone name: TUS-61-M24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C82768 [cLET-21-H14] Trace: SGN-T107883 EST: SGN-E293761 Direction: 5' Facility: TIGR
Clone: SGN-C190978 [TUS-61-M24] Trace: SGN-T342035 EST: SGN-E541160 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E548504Length: 805 bp (887 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E548504 [] (trimmed) TCTTTGTGAAGTCTAAATTCTGATCAGAACCCTAATTGAAACAATCGCTAAATCTTCAAATAATCACTTTTCTCTTTCCCAATTTTGATCAATTA
CAGCTATGGCGACCAGTGGAAACAAGAATATGAACGCCAAATTGGTGCTCCTTGGGGATGTTGGAGCTGGAAAATCTAGTCTAGTTCTGCGTTTT
GTTAAAGGACAATTTATTGAATTTCAGGAATCAACCATAGGTGCTGCATTTTTCTCTCAAACAGTAGCAGTAAATGATGCAACTGTAAAATTTGA
AATATGGGATACAGCAGGCCAAGAGAGATACCACAGTCTAGCTCCAATGTATTACAGAGGTGCTGCAGCTGCTATTATTGTTTATGATATAACAA
ATCAAGCATCATTTGATAGAGCAAAAAAATGGGTTCAGGAACTTCAAGCACAAGGTAATCCGAATATGGTGATGGCACTAGCCGGAAATAAGGCA
GATTTGTTAGATGCAAGAAAAGTGGCTGCTGAGGAAGCACAAACATATGCGGAGGAGAATGGTCTGTTCTTCATGGAAACATCTGCAAAAACTGC
ATCTAATGTTAATGATGTTTTCTCTGAAATAGCAAAGAGACTGCCTCGACTTCAGCCAGCACAAAATCCATCTGGGATGGTTCTTATGGATAGGC
CTGCTCAAACACCGGCTAGTGCTTCTTGTTGCTCTTAAATCTCTGCTGGTGCTTTTCATCTCAATGTTGTTTTTGCTTAATTTGTTTGTGCTGAT
TATTAGAGTTCGTTGTGCTCATGGTCCATCACTGTACAGATTTCA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548504] SGN-U565736 Tomato 200607 Build 2 30 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349379 [Download][View] Facility Assigned ID: TUS61M24_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0018 Quality Trim Threshold: 14.5