EST details — SGN-E548515

Search information 
Request: 548515Match: SGN-E548515
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191019Clone name: TUS-61-O17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C83296 [cLET-24-B12] Trace: SGN-T108662 EST: SGN-E296145 Direction: 5' Facility: TIGR
Clone: SGN-C191019 [TUS-61-O17] Trace: SGN-T342108 EST: SGN-E541233 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E548515Length: 807 bp (895 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548515 [] (trimmed) GTAATAGTAAATTGCAACGTTTGATCATATAATAACTGAAGTTTGTTACATTGATATGATAAACTTTGTTGAAAATTTTGATCCTATTTATGTTT
TGGAGGGCCAGTTTCTATACCAACCAGCCCATGCAGAAACTAAACCACTAATGCCTAAAGTAACTGTATGGTTGCAGAATGGATTTGGTTCAATT
TCAGCTAAGGCTATTATAAGGTCAGCAATATTAGCAGCCACACCCATCAGTCTCATTATTCTATCCATTCTAATTTTCTTAATTTCTTCTTTAGA
ATCCTTCTCTTCAATCAATAACTTCCTCTCTGCTTTTAATCCCCTTGTGATGAGAATAAAATCTGAAATAACGAAAAATACGTATCCAACAGACT
CACCAAATGCTGAAATGAAGCTCATCCTTTTCGCATATTTACCATCGATTACTCCAATTCTCGCCAGCCAGAGGAAATGGTCGAAGAAGAAATAA
ACCATTTCCCCTGAATTGGCGAGAACTGCGAGCAGTCTGAAACCCGGGGTGGTCCCGGGGCTTCTTCGGAGAGCGTTGAATCCCGTGAGGGATCG
ACCTGTACGGAAGGCTTTTCGGCTGAGGCCAGAAGCCACTTCCCATTGCTTGGCTCGAGTGGCTAAGTCAGGGTACGTCGTCTCGACGTGCCAAT
TTACGAGCTTGGAAACGTACTGGAAAGTCTTGACAAGCTTGTCGATTCCATCTCTCTTTGCTAAGAAAATTACCAGCTTGTCCACTGTGTCATTC
ATGGTAAGATAAAGAGTTAGGGAAATTGGATGAAATTTTTTATTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548515] SGN-U565969 Tomato 200607 Build 2 8 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349390 [Download][View] Facility Assigned ID: TUS61O17_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0040 Quality Trim Threshold: 12.5