EST details — SGN-E548663
| Search information |
| Request: 548663 | Match: SGN-E548663 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191543 | Clone name: TUS-63-E13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C89031 [cLEW-11-G24] | Trace: SGN-T112931 | EST: SGN-E300091 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191543 [TUS-63-E13] | Trace: SGN-T343008 | EST: SGN-E542133 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548663 | Length: 685 bp (897 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548663 [] (trimmed)
AAATTTGCTTTTCTGAAGACAAAAGCGTCGTCTCTCATTAGTTCATAATAAGCTAAAGACCAAGACAAAGTACACACGTTTTATATCAAAAAAAA
AAAAAGAACAATTTACATAATACTACAGCTGCCTGTATTCTCATCGCTGAACATATGAGTAAAATTATCATGCACCGGAGCACCCATAGGTGGCG
GTGGCCCGTAACTCACGGATGGATGTTGCCGGGCGTACATCATCGGATGGGCACCGTACATGTTTGGATGGGCTCCGTACATGTCATATCCGGCA
GGCCGCTGTTGGTTCATCATCATTTGTGCCATATACTGTTGTTGTTGTTGGCTATAAGGGTTGTTGCCTCCTTGACCCATCCCCGGGTAACCGCC
AGGACCACCGGCGGGTAGTCCTTGAGCTGCCGACATATGACCCATTGGGCCCATGGTCATTGGACCTCCTCCACTTTTTTGACCCATACTCATCA
TACCATGTGGCCCTCCTTGTTGCAGACTGTTCATCATTAGACCTCCATCCATCTTCCCTCCCCCTCCTCCTTTCTGAGGTACTGCTGCACCACCA
AAACTTCCATTATTGTTACCTTTACCACCATTTTTACCAACATTCTGATTCTGGTTCCCTCCTTTCCCCTGTTTTCCTCCCTCATTATTATTGTT
TTTGCGCCACCATGATGATT
AAAAAGAACAATTTACATAATACTACAGCTGCCTGTATTCTCATCGCTGAACATATGAGTAAAATTATCATGCACCGGAGCACCCATAGGTGGCG
GTGGCCCGTAACTCACGGATGGATGTTGCCGGGCGTACATCATCGGATGGGCACCGTACATGTTTGGATGGGCTCCGTACATGTCATATCCGGCA
GGCCGCTGTTGGTTCATCATCATTTGTGCCATATACTGTTGTTGTTGTTGGCTATAAGGGTTGTTGCCTCCTTGACCCATCCCCGGGTAACCGCC
AGGACCACCGGCGGGTAGTCCTTGAGCTGCCGACATATGACCCATTGGGCCCATGGTCATTGGACCTCCTCCACTTTTTTGACCCATACTCATCA
TACCATGTGGCCCTCCTTGTTGCAGACTGTTCATCATTAGACCTCCATCCATCTTCCCTCCCCCTCCTCCTTTCTGAGGTACTGCTGCACCACCA
AAACTTCCATTATTGTTACCTTTACCACCATTTTTACCAACATTCTGATTCTGGTTCCCTCCTTTCCCCTGTTTTCCTCCCTCATTATTATTGTT
TTTGCGCCACCATGATGATT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548663] | SGN-U568435 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349538 [Download][View] | Facility Assigned ID: TUS63E13_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 20.5 |
Working
