Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E548663

Search information 
Request: 548663Match: SGN-E548663
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191543Clone name: TUS-63-E13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C89031 [cLEW-11-G24] Trace: SGN-T112931 EST: SGN-E300091 Direction: 5' Facility: TIGR
Clone: SGN-C191543 [TUS-63-E13] Trace: SGN-T343008 EST: SGN-E542133 Direction: 5' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E548663Length: 685 bp (897 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E548663 [] (trimmed) AAATTTGCTTTTCTGAAGACAAAAGCGTCGTCTCTCATTAGTTCATAATAAGCTAAAGACCAAGACAAAGTACACACGTTTTATATCAAAAAAAA
AAAAAGAACAATTTACATAATACTACAGCTGCCTGTATTCTCATCGCTGAACATATGAGTAAAATTATCATGCACCGGAGCACCCATAGGTGGCG
GTGGCCCGTAACTCACGGATGGATGTTGCCGGGCGTACATCATCGGATGGGCACCGTACATGTTTGGATGGGCTCCGTACATGTCATATCCGGCA
GGCCGCTGTTGGTTCATCATCATTTGTGCCATATACTGTTGTTGTTGTTGGCTATAAGGGTTGTTGCCTCCTTGACCCATCCCCGGGTAACCGCC
AGGACCACCGGCGGGTAGTCCTTGAGCTGCCGACATATGACCCATTGGGCCCATGGTCATTGGACCTCCTCCACTTTTTTGACCCATACTCATCA
TACCATGTGGCCCTCCTTGTTGCAGACTGTTCATCATTAGACCTCCATCCATCTTCCCTCCCCCTCCTCCTTTCTGAGGTACTGCTGCACCACCA
AAACTTCCATTATTGTTACCTTTACCACCATTTTTACCAACATTCTGATTCTGGTTCCCTCCTTTCCCCTGTTTTCCTCCCTCATTATTATTGTT
TTTGCGCCACCATGATGATT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E548663] SGN-U568435 Tomato 200607 Build 2 18 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T349538 [Download][View] Facility Assigned ID: TUS63E13_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.982 Expected Error Rate: 0.0023 Quality Trim Threshold: 20.5