EST details — SGN-E549399

Search information 
Request: 549399Match: SGN-E549399
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C194145Clone name: TUS-70-A23
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C102853 [cLHT-31-O17] Trace: SGN-T171667 EST: SGN-E359281 Direction: 5' Facility: TIGR
Clone: SGN-C194145 [TUS-70-A23] Trace: SGN-T347481 EST: SGN-E546606 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E549399Length: 771 bp (914 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E549399 [] (trimmed) GATTTGATTTTCCCACTTTTATTTATATCTTGTTTCATTTTCCCATCCACAACAAATGGCTACTCCAACGCAATCATAAAAGCTTGGTGCACCCA
AACACCTCATCCACAACCTTGTGAATACTTCTTATCACAAAATCCCAAAATTACATCTCCTATCATAAAAAAATCAGATTTTCTAAAAGTGTCAC
TAGACTTAGTGTTAGACCGTGCGTTACGTGCCCAACTGAACACATATTCACTAGGTTCAAAATGTCGTAACGAGCGCGAAAAAAACGCATGGGCT
GATTGCATTGAACTCTATGAAAACTCAATCAACAAAATCAAAAGCACAGTTGATCCAAACACAAAATGCTCAGCTACTGATGCTCAAACATGGTT
AAGTACATCCTTAACAAATCTTGAAACATGTAAAGCAGGTTTCGAAGAATTAGGCGTTACGGATTATGTTATGCCACTAATATCAAATAATAATG
TGTCATCTTTAATAAGTAACGCTTTAGCTTTAAATCATGGTTATTATACTGAACCTACTAAAAGTAGTACTACTACTCAAGTTGATGGATTTCCA
ACTTGGGTATCTCCTGGTGATAGAAAATTGTTGCAATCGTCGCCGTCGTCGTCGTCGTCGTCAACGGCTTCTCAGGCGAATGTAGTGGTGGCTAC
TGATGGTTCAGGGGATTTTAAGACAGTGAAAGAAGCTGTAGATGCTGCTGCCAAGAATAAGGAAGTGGGAGGTTGTGATATATGTGAAGGCTGGT
ACTTATATGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E549399] SGN-U566717 Tomato 200607 Build 2 33 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350274 [Download][View] Facility Assigned ID: TUS70A23_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0044 Quality Trim Threshold: 14.5