EST details — SGN-E549606
| Search information |
| Request: 549606 | Match: SGN-E549606 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194879 | Clone name: TUS-71-P13 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C109784 [cLPT-1-A18] | Trace: SGN-T177822 | EST: SGN-E366397 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194879 [TUS-71-P13] | Trace: SGN-T348742 | EST: SGN-E547867 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549606 | Length: 813 bp (929 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E549606 [] (trimmed)
ATGTTAAAGTTCTGCAGCTTTCTTACTTCAAAAATGGCAGGATTTACATGTAAAAACATAGACAAACAGATAACCCTGTCAGTGTGCCAATGCCG
AAGCAACTACTTCAATGTTGGAGTGCCTGATGCCAGGCAACATCAGCATCTATACATGTTTGAATTTTGAGTATGATCTGTTAGATGAGACAAGT
GTAATGGAGACATAATCTGCCGCCCTAGTGCTAACCACCAAATGAAATATCTGCAAAATTAGAAGGGAAGAGTGTTGTTTTGGCCTACAGGCTGC
AGCAGCATTTCATATAAGTGGTCATAGAAAGAAACTCCATATCCAAATGAGCTGAACTTGTCAGATGAGCCCAAAGATCCAAGAAGAATGAATAA
ACAAAGAACTGAAAAGCGTGGAATCGTCATATCATCTCTGTTTCTTTTGCAGCAGCAAGTCTTGCATTCTCACGATCCTGCTTGAATGTCCAATA
CAAAGGGGTGTAAAACAAGCAACATAAACCAAAAGGCACGGCCATCATTGAAAAGAGGCCTTTTGACAGCGCTAAAGCCTCCCTTGGAGATCCTA
ATATCGGATCAACAGATTTGGCATCATAACCGTACATTTTCTCAGCAAGAATCCCTACAATTGGAGCAGCAAAAGAAGAAAATGAACCCTCAAAC
GCACGATCAAAAGCATAAATCATGGTGCGGTGCTTTGAAGGCACCACTTCTGCAAACATGGGACCATTTGTAGCAGTAGCACACCAGCTGATTGT
GAGGCCCATTATGAATAAAGTCACAGCAAATGTGGAATAGCTGCTTATAGACG
AAGCAACTACTTCAATGTTGGAGTGCCTGATGCCAGGCAACATCAGCATCTATACATGTTTGAATTTTGAGTATGATCTGTTAGATGAGACAAGT
GTAATGGAGACATAATCTGCCGCCCTAGTGCTAACCACCAAATGAAATATCTGCAAAATTAGAAGGGAAGAGTGTTGTTTTGGCCTACAGGCTGC
AGCAGCATTTCATATAAGTGGTCATAGAAAGAAACTCCATATCCAAATGAGCTGAACTTGTCAGATGAGCCCAAAGATCCAAGAAGAATGAATAA
ACAAAGAACTGAAAAGCGTGGAATCGTCATATCATCTCTGTTTCTTTTGCAGCAGCAAGTCTTGCATTCTCACGATCCTGCTTGAATGTCCAATA
CAAAGGGGTGTAAAACAAGCAACATAAACCAAAAGGCACGGCCATCATTGAAAAGAGGCCTTTTGACAGCGCTAAAGCCTCCCTTGGAGATCCTA
ATATCGGATCAACAGATTTGGCATCATAACCGTACATTTTCTCAGCAAGAATCCCTACAATTGGAGCAGCAAAAGAAGAAAATGAACCCTCAAAC
GCACGATCAAAAGCATAAATCATGGTGCGGTGCTTTGAAGGCACCACTTCTGCAAACATGGGACCATTTGTAGCAGTAGCACACCAGCTGATTGT
GAGGCCCATTATGAATAAAGTCACAGCAAATGTGGAATAGCTGCTTATAGACG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549606] | SGN-U569216 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350481 [Download][View] | Facility Assigned ID: TUS71P13_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0035 | Quality Trim Threshold: 14.5 |
Working
