EST details — SGN-E550014

Search information 
Request: 550014Match: SGN-E550014
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169532Clone name: TUS-5-P10
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C21103 [cLED-31-K22] Trace: SGN-T56684 EST: SGN-E242765 Direction: 5' Facility: TIGR
Clone: SGN-C169532 [TUS-5-P10] Trace: SGN-T351267 EST: SGN-E550392 Direction: 3' Facility: Avesthagen
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Sequence 
Sequence Id: SGN-E550014Length: 751 bp (813 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E550014 [] (trimmed) GTTTAACTCGTACTCCAAGTGGTGGACTGTCTTTATTCCATGTGCTGTTAAGAGATGATTCTAAAGGTGAAGTAGTGAGCACTTATTATGTACAT
GTAACGAGCATAATCACTTCAGATTATGTCAACATGTTATGTTCTAGAGAGATGTCTGATTCTGATGATAATCCAATCTGACTCGTGACGCTCTT
GCATTCTCTACATCATTTGGAGTGCTTCCGTGTCTTTCCAATTCTAATTCAATAACTCATCTTGCTTTTACATTCATCGTACATCGACTTATGTT
TGTTTTTTTTTGTAATTTATGTAGCTTATCTTTTCATGACCAAAAAGAAAGATGTGGGAACTGAGGCAGGAGAAGTGTCAGATGTTCCTAGCAGT
TCAGTTTCATCAACCGCTGCTATTACTGCAGTAGCTGGAAAGCAAGCAACTGTTCCAGCTCTTGTGCAGCCTGCTGTTGTTCATGAACCAATACC
AGAAGATCGACAACGAGAACTAATGAAGTGGATATTGGAAGAGAAGAGAAAACTTAAACCAAAAGATCCCGAGGAGAAAAAGCGCATTGATGAGG
AGAAAGCTATGCTCAAGCAGTTTATTCGAGCCAAGTCCATTCCAAGTTTGTAATGGAGGAGACCCTTCACAACTTTGATACTACTAGCTTGGAGA
TGTACAAAGGTTGGATTTTCCCTTTTCACTGCNAATATGGCACTGAGGAAATCAATGGCTTGAAACAATGAATGTATATTGGATCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E550014] SGN-U577443 Tomato 200607 Build 2 17 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T350889 [Download] [View] Facility Assigned ID: AGT-274_B12_Tus5#3-H10.T3_095
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0079 Quality Trim Threshold: 14.5