EST details — SGN-E550038
| Search information |
| Request: 550038 | Match: SGN-E550038 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169528 | Clone name: TUS-5-P6 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C21093 [cLED-31-K13] | Trace: SGN-T56644 | EST: SGN-E242725 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E550038 | Length: 615 bp (817 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E550038 [] (trimmed)
ACCACTTTTGCATCCCTCAAATTGATTATACAAACAGCTACTAATTACAAGTTACCTGTTCTCAAGCTCTACCATTTCAAAATTCCAAAAAAACA
GACTGGAAAAATTAATTCAAAAAAAAAAAATGAAGAAAAAAAAATTTCTTTCTGAATCGTAAACCCAAAAGGAAAAAGGAAAAGGGAAAAATACA
ATCCGTAAAAAAATAAACTTCAAACAAGTCCTTCATGGAAATGCCTCCAAATCACTACTCTTTTTTCCATTATTAGGTGGGGGGCCAATCTCTTT
ACAAAATGCCTCCCACAGCTGCTGTTCTATCCCCAGCTTCCTCATTTCTATCAAACCTCTTTCAACATCAACTGCATCATGAGGGGTTGGGGTCT
GTCCACTACGGCCTATCCAAACCTGAAGTCTCTCTTCTGCAATATCCTCTCCCTGTTGAAAAAAAAAAGCCTATCCCTCATACTTCAAAGGCACA
AGGGGAAGGATGGCCACCATTTAAATCTTTCGGGAAAAATACACTGGCTACTAAAAAAAATGATGATGAAGGGAGAACGGGTTCAAGTTGCCTTT
ATGTTAAGGTTAGCATGGATGGTGCTCCATATCTGAGGAAAGTTG
GACTGGAAAAATTAATTCAAAAAAAAAAAATGAAGAAAAAAAAATTTCTTTCTGAATCGTAAACCCAAAAGGAAAAAGGAAAAGGGAAAAATACA
ATCCGTAAAAAAATAAACTTCAAACAAGTCCTTCATGGAAATGCCTCCAAATCACTACTCTTTTTTCCATTATTAGGTGGGGGGCCAATCTCTTT
ACAAAATGCCTCCCACAGCTGCTGTTCTATCCCCAGCTTCCTCATTTCTATCAAACCTCTTTCAACATCAACTGCATCATGAGGGGTTGGGGTCT
GTCCACTACGGCCTATCCAAACCTGAAGTCTCTCTTCTGCAATATCCTCTCCCTGTTGAAAAAAAAAAGCCTATCCCTCATACTTCAAAGGCACA
AGGGGAAGGATGGCCACCATTTAAATCTTTCGGGAAAAATACACTGGCTACTAAAAAAAATGATGATGAAGGGAGAACGGGTTCAAGTTGCCTTT
ATGTTAAGGTTAGCATGGATGGTGCTCCATATCTGAGGAAAGTTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E550038] | SGN-U578114 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350913 [Download] [View] | Facility Assigned ID: AGT-274_F11_Tus5#3-H6.T3_093 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.934 | Expected Error Rate: 0.0223 | Quality Trim Threshold: 14.5 |
Working
