EST details — SGN-E551299
| Search information |
| Request: 551299 | Match: SGN-E551299 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C186727 | Clone name: TUS-50-L21 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C9048 [cLEC-54-F6] | Trace: SGN-T32974 | EST: SGN-E209665 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E551299 | Length: 627 bp (772 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E551299 [] (trimmed)
GTGAGATTGATGCAATCAGAATTCAGAAGTCGTTAAACGGATTTCCACTTATCAAATTTGTGTTGTTCCTATGGCTGTTTTCAGTCCCACTTGTT
CTTCTACTTCCCCACTTCTCTCCTTCAGAAACAACATCTCTTTCTTCCCTTCACATCGCCCTTCTTTTCCCGGAGTCCGGTGCACTCTCACAGTG
AAAGCCACCGTCAGCGTCGAATCTCCGTCGTCTTCCTCCACCGACTGCAGGGATGACTCGCCCAAGGTCTTACTTGAAGTCCGGGACCTCTCCGC
TGTCATAGTCGAGTCAAAGCAGCAAATTCTCAATGGTGTTAACCTCACTGTCCGCCAAGGCGAGGTACATGCTGTAATGGGTAAGAATGGTTCTG
GAAAGAGCACCTTTGCCAAGGTTCTTGTTGGGCATCCAGATTATGAAATTACAGGAGGCAGTGTGTCATTTAAAGGTGAGAATCTACTTGAGATG
GAACCCGAGGAAAGATCTCTTGCTGGTCTTTTCATGAGCTTCCAGTCCCCAGTTGCCATACCTGGAGTAAGCAATATTGACTTTCTTAACATGGC
GTATAATGCTCAAAGGAGGAAACTTGGACTGCCAGAACTGGGACCAATTGAGTTTTA
CTTCTACTTCCCCACTTCTCTCCTTCAGAAACAACATCTCTTTCTTCCCTTCACATCGCCCTTCTTTTCCCGGAGTCCGGTGCACTCTCACAGTG
AAAGCCACCGTCAGCGTCGAATCTCCGTCGTCTTCCTCCACCGACTGCAGGGATGACTCGCCCAAGGTCTTACTTGAAGTCCGGGACCTCTCCGC
TGTCATAGTCGAGTCAAAGCAGCAAATTCTCAATGGTGTTAACCTCACTGTCCGCCAAGGCGAGGTACATGCTGTAATGGGTAAGAATGGTTCTG
GAAAGAGCACCTTTGCCAAGGTTCTTGTTGGGCATCCAGATTATGAAATTACAGGAGGCAGTGTGTCATTTAAAGGTGAGAATCTACTTGAGATG
GAACCCGAGGAAAGATCTCTTGCTGGTCTTTTCATGAGCTTCCAGTCCCCAGTTGCCATACCTGGAGTAAGCAATATTGACTTTCTTAACATGGC
GTATAATGCTCAAAGGAGGAAACTTGGACTGCCAGAACTGGGACCAATTGAGTTTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E551299] | SGN-U582143 | Tomato 200607 | Build 2 | 49 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T352174 [Download] [View] | Facility Assigned ID: TUS50L21_T3 |
| Submitter: Koni | Sequencing Facility: Giovanni |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.986 | Expected Error Rate: 0.0029 | Quality Trim Threshold: 14.5 |
Working
