EST details — SGN-E551408
| Search information |
| Request: 551408 | Match: SGN-E551408 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C186449 | Clone name: TUS-50-A7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C3244 [cLEC-1-M9] | Trace: SGN-T24634 | EST: SGN-E200421 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C3244 [cLEC-1-M9] | Trace: SGN-T24635 | EST: SGN-E200422 | Direction: 3' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E551408 | Length: 579 bp (732 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E551408 [] (trimmed)
TTGCCCCCCCTCATACGCTCTTGGGGCTCTTTTAACACCCTTGAAACCCCCACAAAGCCCATTCTGCGGCTTTTAATCGGCTAATGATACCCTTC
ACGCTGCCGGAAAAGTTGACGGCGTTGCTGCCAGAAAAGGTGTCAGATCTGTCACAGAAGGCAAGCCCTTTTTTTTTCATATTACTAGCTCCGTC
TATTTTAACGTGTCTGTTTGGACTTCCATTGTATTTTAGTGCTGATGATTGAACTTTATAACTTCAACTTAAAATTAAGTGTCTGTAAGTATACT
TAAAAACACTTAAAATAATTAAAACTCAAAACAGATTCATAAATTATAGTAAATCAATTTTATGATTACTTTTGACATGTTTTTATTATTTTAGC
TTCAAATGAAGTGCGTATAAGTACTTTTTGAATTTATTCAAAAACTTCAAAAGGAATTATTTTAAATAAGTCTACTGTTTTTTAAGTTTATTTTA
GGTAAAACAATTAAGAAAATTTATTTATCTTTTTTGATTTTCTTGAGAAATTCACTGTTTTGTCTATCTTTGATGATATTGAATGTGTCATTCAN
GTGCTGAAA
ACGCTGCCGGAAAAGTTGACGGCGTTGCTGCCAGAAAAGGTGTCAGATCTGTCACAGAAGGCAAGCCCTTTTTTTTTCATATTACTAGCTCCGTC
TATTTTAACGTGTCTGTTTGGACTTCCATTGTATTTTAGTGCTGATGATTGAACTTTATAACTTCAACTTAAAATTAAGTGTCTGTAAGTATACT
TAAAAACACTTAAAATAATTAAAACTCAAAACAGATTCATAAATTATAGTAAATCAATTTTATGATTACTTTTGACATGTTTTTATTATTTTAGC
TTCAAATGAAGTGCGTATAAGTACTTTTTGAATTTATTCAAAAACTTCAAAAGGAATTATTTTAAATAAGTCTACTGTTTTTTAAGTTTATTTTA
GGTAAAACAATTAAGAAAATTTATTTATCTTTTTTGATTTTCTTGAGAAATTCACTGTTTTGTCTATCTTTGATGATATTGAATGTGTCATTCAN
GTGCTGAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E551408] | SGN-U577389 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T352283 [Download] [View] | Facility Assigned ID: TUS50A7_T3 |
| Submitter: Koni | Sequencing Facility: Giovanni |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.919 | Expected Error Rate: 0.0154 | Quality Trim Threshold: 20.5 |
Working
