EST details — SGN-E551415
| Search information |
| Request: 551415 | Match: SGN-E551415 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C186579 | Clone name: TUS-50-F17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C4424 [cLEC-25-H7] | Trace: SGN-T28674 | EST: SGN-E205258 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E551415 | Length: 687 bp (784 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E551415 [] (trimmed)
TGGGGGTCTTTTAACACGCTTGAAACCCCCACAAAGCCCTTGTTGGGGCTTATTAAGGCATATAACACCACGGAACAAATTATGATAGTTCGGAC
ATGTGAAGAGGAGGTGTGCGGATGCACCGGTAGAGAGGTGTGAGAGGCTGACTATGACAACACACCGTTTCTGCGAAGAAGGTATGTAAGACAGA
GGTTTCCTAACAAACGATATTCTCCTTCTCTTGATTACTTGTTACTAACAGATTCAGTCAGCTTAGCTGTTTTGATAAGGCAATGCAGGTTGATA
GCAAGTTCAAGTGGATTGAGGAAATGATGAAGTGTACTCACTCCACATAAATCAAAGTTGGGGGTTGGTCAAACTACCAGAAGGGAATAAGACAA
TCCAGAATAATGTATGTACAGGATGAAACAGAAGCATAATAGTTCAATGAAATATAAAGCAAGGTTGGTAATAAAAGGTTTTCAACAAAAGGCAT
GTATCAATTTACTGAGATTTTCTCCCTTGTGATTAAATTACCTACTATTCGAGTTGCTTTAGAATTGCTGTAGCATAAGATTTATATTTAGAGCA
TTTAGATGTAAGGACAGCCTCTCTTTATGATGATCAACATGAAAGACGTGTATGCGTAGCAACCTGAAGTGTACATACAGGCTGATAAGAAAAAT
ATGGTGCGTAGACTGAAGAAGA
ATGTGAAGAGGAGGTGTGCGGATGCACCGGTAGAGAGGTGTGAGAGGCTGACTATGACAACACACCGTTTCTGCGAAGAAGGTATGTAAGACAGA
GGTTTCCTAACAAACGATATTCTCCTTCTCTTGATTACTTGTTACTAACAGATTCAGTCAGCTTAGCTGTTTTGATAAGGCAATGCAGGTTGATA
GCAAGTTCAAGTGGATTGAGGAAATGATGAAGTGTACTCACTCCACATAAATCAAAGTTGGGGGTTGGTCAAACTACCAGAAGGGAATAAGACAA
TCCAGAATAATGTATGTACAGGATGAAACAGAAGCATAATAGTTCAATGAAATATAAAGCAAGGTTGGTAATAAAAGGTTTTCAACAAAAGGCAT
GTATCAATTTACTGAGATTTTCTCCCTTGTGATTAAATTACCTACTATTCGAGTTGCTTTAGAATTGCTGTAGCATAAGATTTATATTTAGAGCA
TTTAGATGTAAGGACAGCCTCTCTTTATGATGATCAACATGAAAGACGTGTATGCGTAGCAACCTGAAGTGTACATACAGGCTGATAAGAAAAAT
ATGGTGCGTAGACTGAAGAAGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E551415] | SGN-U580332 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T352290 [Download] [View] | Facility Assigned ID: TUS50F17_T3 |
| Submitter: Koni | Sequencing Facility: Giovanni |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0043 | Quality Trim Threshold: 20.5 |
Working
