EST details — SGN-E553960

Search information 
Request: 553960Match: SGN-E553960
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C332681Clone name: cTSC-2-M17
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E553960Length: 645 bp (1237 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E553960 [] (trimmed) GCAAAGAAGTGTGGAAGATCAATCTATTCTTGTAGCAACTTATGAGGGGGAGCACAATCACCCACATCCATCAAAAATGGATCAAACACCCCCGA
ACTCTACCCGATGTGTAACACTTGGTTCAGTCCCATGCTCAACATCTCTCAGCTCATCTGGACCAACAATTACCCTGGACCTTACCAAGCCTAAA
TCCCATGAAGAAACAAGAAATTCAAGTACTCGCAAGGTTAATTCACCAGAAATTCAACAGTATATCATAGAACAAATGGCTTCTTCCTTGACCAA
AGATCCGAGTTTCAAAGCAGCCCTTGCAGCCGCCATATCGGGAAAATTTCTCCAGCATAATCAGACAGAGAAGTGGTAAAGAAGGAAATAGTAGT
GGAATCTAGTCAAGGGTTGTTGTCAATTTGCTTGTATTTGACTAGTTGAGGATCGAAGGGCCAATTTGATGTATATACCACATTAGAAAATTTGA
AGTTGATAGTATGGTAGGCGAGCTTCATCCTTCGGACAAAAAAATATATGATGGGTTAAAGGGGAAGTGGGATTAATTCAAGTTGTAATATGGGC
TGCCTCAACTAAAGCCCAAAAGGCAGCTGATTCAGCCACCTAAAATACACCACTTGTTTAGTTGAAGATTCTGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E553960] SGN-U589412 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T356452 [Download] [View] Facility Assigned ID: ctsc2m17
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0007 Quality Trim Threshold: 12.5