EST details — SGN-E554427

Search information 
Request: 554427Match: SGN-E554427
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C333241Clone name: cTSC-4-E17
nocartOrdering Not Available
Library Name: cTSCOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seed
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E554427Length: 649 bp (1228 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E554427 [] (trimmed) GCAGAGAAGATCCTTCAATGCAAGGACCTAGTGGGAGTAGAAGTGTCGTTGCGAGTGGCCATTCTAGTATCGGAACTATAATGGCTGGCAATCAA
ATTGCAAAAGTCAAACCACCACCAACTCAGGCGAAGTCCAAAATATAATTCCCAAGCACAAGGCAGTTGGAATTCAGCTTTTTAAGCCTTAATTT
GGGCTGTCTTTTGAAGTTGGTGTCAACTTAGTGGTTCTTTGCCCTGATAGTGGCGTGAAAGGTTGTTGGTTCAAGTTTAAGGCTATACATGTATC
ACAAAAATATCTAAAAGTTCAATATAATGTCATCTAGGATTGTGATGGTCCTTAAAAGCTCGAGGTCCCATAACAACCGTGACTATAACTTAAAT
CTGTATACTATAACATATGATATACTTGCATATATTAACTTGTTCGCTCTACCTTTACCATATTTTTTCATCACCTTTGTTTGATTTATAGGAAT
GGATTACTTCCTACTGAGTTGGAGGATATGAAAAATTGGGCTTCAGATACACATGGCACATCACAGTTCAGACCCAACCGCTGGGGGATTATTTC
TGAGTATTCTTTAGAATAGAAAGTTGTAGATGTATGCTTGATGGGCTGAGGGGTGATGGAAAAGATGTTGTTGTATTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E554427] SGN-U601090 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T357012 [Download] [View] Facility Assigned ID: ctsc4e17
Submitter: Koni Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0121 Quality Trim Threshold: 14.5