EST details — SGN-E555647
Search information |
Request: 555647 | Match: SGN-E555647 |
Request From: web user | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C334185 | Clone name: cTSC-6-M17 |
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Library Name: cTSC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: seed
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E555647 | Length: 492 bp (1245 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E555647 [] (trimmed)
GGCAAATGCAGGCCTTTTTCATAAGGTGATCAACACTGTCCAGTTAGCTGGGAAATTGGAGGTCCCTGAAAATACTTCCTTATTCAATTCTGTTA
TTTATGCGTGTGCAAAGGCTGAGGACGTAATGGAGATGGGGAGGGTTTTCAAGCGAATGAAAGACAAGCAATGTCAACCTGATCTCATGACTTAC
TCTACTATGATAGATGCATACCAGAAAGAAGGCATGACAGACAAAGTTTATGATTTGGAACAAGAAAAGCTCTTGAAGGTTGCCATTCACTCCAA
TGGCAGCCACAATGATGAAAAAAAGCTAGAGCTGCTGCCTACTTGAAAGCTAAGTATGCAATATCTCTGAACAATGCATCCAAGCTACATCTTTT
TTTTTTCTTTTACAGAACTTAGATTGCCTAGATCATCTAGCTGTTTTTCTGAAACTAATAATTGTCCACTGTCATTGAGTTTATGAAGTTAAGAG
GTGACCTAGGTATGACT
TTTATGCGTGTGCAAAGGCTGAGGACGTAATGGAGATGGGGAGGGTTTTCAAGCGAATGAAAGACAAGCAATGTCAACCTGATCTCATGACTTAC
TCTACTATGATAGATGCATACCAGAAAGAAGGCATGACAGACAAAGTTTATGATTTGGAACAAGAAAAGCTCTTGAAGGTTGCCATTCACTCCAA
TGGCAGCCACAATGATGAAAAAAAGCTAGAGCTGCTGCCTACTTGAAAGCTAAGTATGCAATATCTCTGAACAATGCATCCAAGCTACATCTTTT
TTTTTTCTTTTACAGAACTTAGATTGCCTAGATCATCTAGCTGTTTTTCTGAAACTAATAATTGTCCACTGTCATTGAGTTTATGAAGTTAAGAG
GTGACCTAGGTATGACT
Unigenes |
Current Unigene builds | |||||
[SGN-E555647] | SGN-U576718 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T357956 [Download] [View] | Facility Assigned ID: ctsc6m17 |
Submitter: Koni | Sequencing Facility: Cornell |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.953 | Expected Error Rate: 0.0157 | Quality Trim Threshold: 14.5 |