Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E641947

Search information 
Request: 641947Match: SGN-E641947
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C423983Clone name: cccp12c18
nocartOrdering Not Available
Library Name: cccpOrganism: Coffea canephora

Tissue: Pericarp
Development Stage: All development stages combined

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E641947Length: 473 bp (580 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E641947 [] (trimmed) GCAATCATTAAAAAAAGAAAAAAAAAAACATAGCAAGAAATGGGGGCATATAGGGCTGATGAAGATTATGATTACCTATTCAAGGTGGTGCTAAT
AGGGGACTCAGGTGTCGGAAAATCGAACCTCTTGTCTCGTTTCACCCGCAATGAATTTAGTCAAGAATCCAAGTCCACCATTGGCGTTGAGTTTG
CCACCCGCAGCATTCAGGTTGATGACAAAATCGTTAAGGCTCAAATTTGGGACACTGCCGGCCAAGAAAGGTATCGTGCCATCACAAGTGCATAC
TATCGAGGAGCTGTTGGTGCTCTAATTGTCTATGATGTTACTCGTCATGTGACATTCGAAAATGTGGAGAGATGGCTTAAGGAGCTTCGGGATCA
TACAGACGTGAACATTGTGATCATGCTCGTTGGAAACAAGGCAGACCTACGTCACCTGCGAGCTGTTCCTACTGGAGATGCAACAGCTTTTGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E641947] SGN-U627965 Coffea canephora Build 3 1 ESTs assembled
[SGN-E641947] SGN-U644165 Coffee species Build 1 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T447846 [Download] [View] Facility Assigned ID: cccp12c18.i
Submitter: None Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 15