EST details — SGN-E661216
| Search information |
| Request: 661216 | Match: SGN-E661216 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C409998 | Clone name: cccl25e1 |
| ||
| Library Name: cccl | Organism: Coffea canephora |
Tissue: LeafB
Development Stage: Young
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E661216 | Length: 887 bp (973 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E661216 [] (trimmed)
GTCTAGAGTCCCTTTAATTGGTGGTGCCCTTTTTCTGCTTCAACAATTTGCCCGCAAAAATGGAGTTCTCTTCTTTTCATCATTGACTTTTGCTG
ACGTTGGAATCACAAACAGTGCTCTAGCAAGCTTATGTGTTGGATTTACTGACCTTGCAGGGGCACTCAACGCTACATACTTGATGGAAAAGCAG
GGAAGGAAAAGCCTTCTGATAGGAAGCTACTTGGGAATGACTGCGTCGATGTTGCTTGTAGTGTCTGCCATCAGCTTGCCAGTAGAGAAGGACAT
TGGCAACACCTTATCTGTTCTAGGAACTACCATGTACATATTCTTTTTTGCCTCTGGAGCCGGGCCAGTAACTGGTCTTATTATACCAGAGCTTA
GCAGCACCAGGACACGAGGAAAGATCATGAGCTTCAGTCTTGCCGTTCACTGGGTATGCAACTTCTTGGTGGGACAATTTTTTCTGGAACTGGTG
GAAAAATTTGGTGTGGGTTCAGTTTATGCAGGCTTCGGCGGATTTTCCTTGATGGCAGCAACATTTGGTTATTACTTTACAGTTGAAACTAAAGG
CCGATCTCTTGAAGAAATCGAGATGTCATTTGGGAATAAGTGATATTGTCTAATCCAGTGTGGAAAAGGGGAATATCTGTTCCATGTAAAAGGGC
TTCATTCTCCTCCATGGTCTCTAAAATTGATTCACAAGTTCGTGGTTTTGGCTGCTTGATCCTCCTACAACTTCTAATTTGGTGAAGTTGTCTCA
GTAGACAGGCAAAAAAGGTGTTCTGAATTTTATAGGTGCTTAATAGGTATTCTTCTCAATGCTTTAATTTATTTTACTGTTAATCTTTATGGAAT
ACTTCTGCAAAAAGAGGGAGCTGGATGGTTTA
ACGTTGGAATCACAAACAGTGCTCTAGCAAGCTTATGTGTTGGATTTACTGACCTTGCAGGGGCACTCAACGCTACATACTTGATGGAAAAGCAG
GGAAGGAAAAGCCTTCTGATAGGAAGCTACTTGGGAATGACTGCGTCGATGTTGCTTGTAGTGTCTGCCATCAGCTTGCCAGTAGAGAAGGACAT
TGGCAACACCTTATCTGTTCTAGGAACTACCATGTACATATTCTTTTTTGCCTCTGGAGCCGGGCCAGTAACTGGTCTTATTATACCAGAGCTTA
GCAGCACCAGGACACGAGGAAAGATCATGAGCTTCAGTCTTGCCGTTCACTGGGTATGCAACTTCTTGGTGGGACAATTTTTTCTGGAACTGGTG
GAAAAATTTGGTGTGGGTTCAGTTTATGCAGGCTTCGGCGGATTTTCCTTGATGGCAGCAACATTTGGTTATTACTTTACAGTTGAAACTAAAGG
CCGATCTCTTGAAGAAATCGAGATGTCATTTGGGAATAAGTGATATTGTCTAATCCAGTGTGGAAAAGGGGAATATCTGTTCCATGTAAAAGGGC
TTCATTCTCCTCCATGGTCTCTAAAATTGATTCACAAGTTCGTGGTTTTGGCTGCTTGATCCTCCTACAACTTCTAATTTGGTGAAGTTGTCTCA
GTAGACAGGCAAAAAAGGTGTTCTGAATTTTATAGGTGCTTAATAGGTATTCTTCTCAATGCTTTAATTTATTTTACTGTTAATCTTTATGGAAT
ACTTCTGCAAAAAGAGGGAGCTGGATGGTTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E661216] | SGN-U623451 | Coffea canephora | Build 3 | 1 ESTs assembled | |
| [SGN-E661216] | SGN-U629456 | Coffee species | Build 1 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T433861 [Download] [View] | Facility Assigned ID: cccl25e1.i |
| Submitter: None | Sequencing Facility: Cornell |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.000 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 15 |
Working
