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EST details — SGN-E672679

Search information 
Request: 672679Match: SGN-E672679
Request From: web userMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C461346Clone name: cccs46w15g20
nocartOrdering Not Available
Library Name: cccs46wOrganism: Coffea canephora

Tissue: Endosperm and perisperm
Development Stage: 46 week after pollination

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E672679Length: 548 bp (954 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E672679 [] (trimmed) TCAAAAAACTTCTACTCATCCTCTATTGTGGTGTGGGAAAGAGTTGCCTTCTTTTGCTTTTTTCAGATGGTTCCTTCTCTACCCTTTTTCCCCCT
TCCATAGGAATTGACCTCCCGATACCAGCCTTTGAGCTAGATGGCTTGCGAATCAGACTCCATATCTGGGATTCTGCTGGCCAGGAGCGGTTCAA
ATCGATCACCACTGCTAATTATCGGGGAGCTATGGTATTATTGTGGGTCTATGATGTTACTGATGAATCATCCTTCAATAATATTAGGAACTGGA
TTCGTAACATTGAACAGCATGCATCTGAGGGTGTCAACAAGATTCTGGTAGGGAACAAGGCTGACATGGATGAAAGCAGGGGGGCTGTCCCTACC
TCAAAGGGTCAAGCACTTGCTGATGAGTACGGTATCAAATTTTTTGAGACTAGTGCAAAAACAAATCTTAATGTGGAAGAAGTTTTCTTTTCAAT
AGCAAGGGACATTAAGCAAAGGCTTGCAGACACGGACTCTAAAGCGGAGGCTTCACAATCAAAATTATCAACC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E672679] SGN-U621177 Coffea canephora Build 3 1 ESTs assembled
[SGN-E672679] SGN-U639320 Coffee species Build 1 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T485209 [Download] [View] Facility Assigned ID: cccs46w15g20.i
Submitter: None Sequencing Facility: Cornell
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 15