EST details — SGN-E689639
| Search information |
| Request: 689639 | Match: SGN-E689639 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C466645 | Clone name: LH_Ea01G21 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C466645 [LH_Ea01G21] | Trace: SGN-T494006 | EST: SGN-E693479 | Direction: 3' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E689639 | Length: 797 bp (1002 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E689639 [] (trimmed)
TCGAGATCCTAATGGTCCATTGAGAATGCCTATTATTGACAAATTTAAAGACATGGGAACTGTCGTTATGGGTAAAATTGAGTCTGGAAGCATAC
GTGAGGGTGATAATCTACTGATTATGCCAAACAAGGCTGCTGTAAAAGTTCTTGCGATATTCTGTGATGAAGATCGAGTAAGGCATGTTGGTCCC
GGAGAAAATGTGCGTGTTAGGTTATCTGGAGTTGAGGAAGATGACCTTTTGTCAGGCTTTGTCTTGTGCAGTGTTGCAAAGCCAATACCTGCAGT
TACTGAGTTTGTTGCGCAGTTACAGATTCTTGAGCTGTTGGACAATGCTATTTTTACTGCTGGATACAAAGCTGTATTGCATGTCCATGCGGTTG
TTGAGGAGTGTGAGATTGTTGAACTGATGCAGCAGATTGATTTAAAAACGAAGAAACCTATGAAGAAAAAACCTCTGTTTGTTAAGAATGGCGCT
ATTGTTTTATGCCGTGTTCAGGTTAGCTATCTAATTGAATGCCTGTAGATTGGGAATACATGGTTCTTAGATCAATTCTTATGGTTCTGTCATTC
ATAATTTTGGGTGACTTCGAGTTATATTTGAATTTGCAGAAGGTACAATTCCTGTATCACAATGTGTTTGTGTTTTGTCCCACCTTTCTAACAGG
GAATGATGAAGATTTTCTAGTTTGAGGACAAAATCATTGCTTTACCTTGAAATCCCTAGTCCCTTTCAAGTTCACCCTTTTTTGGTTGTTTTTAG
AGCTAGATCCTTAGGTTAACGTCTTGTGTTGGTATTT
GTGAGGGTGATAATCTACTGATTATGCCAAACAAGGCTGCTGTAAAAGTTCTTGCGATATTCTGTGATGAAGATCGAGTAAGGCATGTTGGTCCC
GGAGAAAATGTGCGTGTTAGGTTATCTGGAGTTGAGGAAGATGACCTTTTGTCAGGCTTTGTCTTGTGCAGTGTTGCAAAGCCAATACCTGCAGT
TACTGAGTTTGTTGCGCAGTTACAGATTCTTGAGCTGTTGGACAATGCTATTTTTACTGCTGGATACAAAGCTGTATTGCATGTCCATGCGGTTG
TTGAGGAGTGTGAGATTGTTGAACTGATGCAGCAGATTGATTTAAAAACGAAGAAACCTATGAAGAAAAAACCTCTGTTTGTTAAGAATGGCGCT
ATTGTTTTATGCCGTGTTCAGGTTAGCTATCTAATTGAATGCCTGTAGATTGGGAATACATGGTTCTTAGATCAATTCTTATGGTTCTGTCATTC
ATAATTTTGGGTGACTTCGAGTTATATTTGAATTTGCAGAAGGTACAATTCCTGTATCACAATGTGTTTGTGTTTTGTCCCACCTTTCTAACAGG
GAATGATGAAGATTTTCTAGTTTGAGGACAAAATCATTGCTTTACCTTGAAATCCCTAGTCCCTTTCAAGTTCACCCTTTTTTGGTTGTTTTTAG
AGCTAGATCCTTAGGTTAACGTCTTGTGTTGGTATTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E689639] | SGN-U596901 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T497859 [Download] [View] | Facility Assigned ID: LH_Ea01G21.f |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.953 | Expected Error Rate: 0.0040 | Quality Trim Threshold: 14.5 |
Working
