EST details — SGN-E690393
| Search information |
| Request: 690393 | Match: SGN-E690393 |
| Request From: web user | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C467399 | Clone name: LH_Ea03G07 |
| ||
| Library Name: LH_Ea | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: Glandular Trichomes
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C467399 [LH_Ea03G07] | Trace: SGN-T493255 | EST: SGN-E694233 | Direction: 3' | Facility: AGI |
| Sequence |
| Sequence Id: SGN-E690393 | Length: 794 bp (1056 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E690393 [] (trimmed)
CCGGTAACAACTCAAAATAAAATCATATATTCAACTTGTCATGGCAACTTAAGTCTTTAAAATATTTAACAAAATAAATGAACAGACTTCTGAAA
CTCTATTGTCTATTTATGAAGCCTCTAAATGACAAAGATGGAAGTCACCACAAGACCCACGACCTCCTAAAAACTTATATGACTGAAAGTAAAAG
TGGAACCCTCCGGAAGTAAGGAGGCTCATCATAGCTAACTCAAGCTCCATGTGGTGATACGAAGTTCCTGACCCTGAATAATACATGTATCTGCA
TCATGAAAGGATGAAGGCCAAATGGCTCAATACGTCAAATGCACAAGCATGTAAGGGGAATCCTAAAGTACAACATAAGCTTGAACTTAATAAAC
AAGAAACATACTTACCTCTTCTCAAACTTACTCAACTCAACTCAACTCAAGAATAAGATACCCAACTCAACGATTATATACTCAACTCAATGGCC
TCGTGCCGAATTCGGCACGAGGCAAATTTGTTGTTGCAAAAAAAGCTGACAGTCTTTACCCCGTCGTAAGTGGAGCCAGTATTGTTGCAAAGGTT
ACTAGGGACCGAGCCTTGCGGGATTGGGTGCTTGATGAAACTGCTGAGAACATGCAAAGGAACTTTGGATCTGGATATCCTGGAGATCCTGAGAC
AAAAGCTTGGCTAGATAATCACAAACATTCAGTTTTTGGGTTCCCAACCTTGGTCCGTTTCAGCTGGGGAACATGTAACGCATACTCCAAGGATA
ATGTCAAAGTAGTATGGGGAATCTGATGCCAATG
CTCTATTGTCTATTTATGAAGCCTCTAAATGACAAAGATGGAAGTCACCACAAGACCCACGACCTCCTAAAAACTTATATGACTGAAAGTAAAAG
TGGAACCCTCCGGAAGTAAGGAGGCTCATCATAGCTAACTCAAGCTCCATGTGGTGATACGAAGTTCCTGACCCTGAATAATACATGTATCTGCA
TCATGAAAGGATGAAGGCCAAATGGCTCAATACGTCAAATGCACAAGCATGTAAGGGGAATCCTAAAGTACAACATAAGCTTGAACTTAATAAAC
AAGAAACATACTTACCTCTTCTCAAACTTACTCAACTCAACTCAACTCAAGAATAAGATACCCAACTCAACGATTATATACTCAACTCAATGGCC
TCGTGCCGAATTCGGCACGAGGCAAATTTGTTGTTGCAAAAAAAGCTGACAGTCTTTACCCCGTCGTAAGTGGAGCCAGTATTGTTGCAAAGGTT
ACTAGGGACCGAGCCTTGCGGGATTGGGTGCTTGATGAAACTGCTGAGAACATGCAAAGGAACTTTGGATCTGGATATCCTGGAGATCCTGAGAC
AAAAGCTTGGCTAGATAATCACAAACATTCAGTTTTTGGGTTCCCAACCTTGGTCCGTTTCAGCTGGGGAACATGTAACGCATACTCCAAGGATA
ATGTCAAAGTAGTATGGGGAATCTGATGCCAATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E690393] | SGN-U587318 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T496945 [Download] [View] | Facility Assigned ID: LH_Ea03G07.f |
| Submitter: Eyal Fridman | Sequencing Facility: AGI |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0046 | Quality Trim Threshold: 14.5 |
Working
