EST details — SGN-C71615
Search information |
Request: 71615 | Match: SGN-C71615 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C71615 | Clone name: cLER-18-I12 |
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Library Name: cLER | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: leaf
Development Stage: 4 weeks
Microarray: Alias clone SGN-C185403 is on microarray TOM1: SGN-S1-1-8.1.9.7
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E282368 | Length: 499 bp (678 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E282368 [] (trimmed)
GGAAAGTAGAAAAGATTCCCTAAAACACTCACCACCTGTTGTCATTCCCAAAATCCAACCTTTTTACTCCTACTTTCCTCTATATTTCTTCCTTC
TTCTTCTCCAAAAAAAATTCTCCATAAAATTCTAAGCAAAACCCATAAATTTTCTTTGATTTTTGAGTATTAATAACCATGGAAGCTGTGTTCAA
AACCCAGAGTTTGTTCTTGAAGTATGGGGTTTGTTGGCAGTTGTTCTTGCTGTAGCTGTGGCTGTAAAGGGGAATTCAGAAGGGGATGCTTTGTA
CGCCCTCCGCCGGAGCTTATCTGACCCGGGTAACGTGTTACAGAGCTGGGATCCAAATCTTGTTAACCCTTGTACCTGGTTTCATGTCACTTGCA
ACGGAGATAATCAAGTTACTCGTGTGGATCTTGGGAACTCAAAGTTATCTGGTCATTTGGTACCTGAGCTCGGAAAGCTTGAACATCTACAGTAT
CTGGAGCTTTACAAAAATAATATT
TTCTTCTCCAAAAAAAATTCTCCATAAAATTCTAAGCAAAACCCATAAATTTTCTTTGATTTTTGAGTATTAATAACCATGGAAGCTGTGTTCAA
AACCCAGAGTTTGTTCTTGAAGTATGGGGTTTGTTGGCAGTTGTTCTTGCTGTAGCTGTGGCTGTAAAGGGGAATTCAGAAGGGGATGCTTTGTA
CGCCCTCCGCCGGAGCTTATCTGACCCGGGTAACGTGTTACAGAGCTGGGATCCAAATCTTGTTAACCCTTGTACCTGGTTTCATGTCACTTGCA
ACGGAGATAATCAAGTTACTCGTGTGGATCTTGGGAACTCAAAGTTATCTGGTCATTTGGTACCTGAGCTCGGAAAGCTTGAACATCTACAGTAT
CTGGAGCTTTACAAAAATAATATT
Unigenes |
Current Unigene builds | |||||
[SGN-E282368] | SGN-U583216 | Tomato 200607 | Build 2 | 165 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T96164 [Download] [View] | Facility Assigned ID: TPRCR54TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.965 | Expected Error Rate: 0.0008 | Quality Trim Threshold: 14.5 |