EST details — SGN-C91818
| Search information |
| Request: 91818 | Match: SGN-C91818 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C91818 | Clone name: cLEW-8-J19 |
| ||
| Library Name: cLEW | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: mixed roots grown under different nutrient and mineral difficiencies
Development Stage: 4-8 weeks
Microarray: This clone is not found on any microarray
This clone has been mapped as cLEW-8-J19.
| Additional sequencing |
| Clone: SGN-C191443 [TUS-63-A9] | Trace: SGN-T342834 | EST: SGN-E541959 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C191443 [TUS-63-A9] | Trace: SGN-T342836 | EST: SGN-E541961 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E300963 | Length: 538 bp (897 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E300963 [] (trimmed)
GGAAAGGTGGAGCTGGTGTTGTGTACCGAGGGTCTATGTCAAATGGCATCGACGTTGCAATAAAGAAACTTGTAGGCCGAGGAACCGGACACCAT
GATCACGGATTCTCAGCTGAAATCCAAACACTAGGAAGGATCCGGCACAGAAACATCGTACGATTACTGGGATATGTCTCAAACAAAGACACAAA
CTTGTTGTTGTACGAATACATGTCAAATGGGAGCTTAGGTGAAATGTTACATGGTGCCAAAGGGGCACATTTGAAATGGGAGACAAGGTACCGTA
TTGCTGTGGAAGCTGCAAAAGGATTGTGTTATTTGCACCATGATTGTTCACCTTCGATTATTCACAGAGATGTCAAGTCCAATAATATTCTGCTG
GATTCCGATTACGAAGCGCATGTTGCTGATTTCGGCCTCGCCAAATTCTTGCAGGATGCTGGTGCATCAGAGTGCATGTCCTCTATTGCTGGCTC
ATATGGTTACATTGCTCCAGAGTATGCATACACATTGAAAGTTGACCAAAAGAGTGATGTATA
GATCACGGATTCTCAGCTGAAATCCAAACACTAGGAAGGATCCGGCACAGAAACATCGTACGATTACTGGGATATGTCTCAAACAAAGACACAAA
CTTGTTGTTGTACGAATACATGTCAAATGGGAGCTTAGGTGAAATGTTACATGGTGCCAAAGGGGCACATTTGAAATGGGAGACAAGGTACCGTA
TTGCTGTGGAAGCTGCAAAAGGATTGTGTTATTTGCACCATGATTGTTCACCTTCGATTATTCACAGAGATGTCAAGTCCAATAATATTCTGCTG
GATTCCGATTACGAAGCGCATGTTGCTGATTTCGGCCTCGCCAAATTCTTGCAGGATGCTGGTGCATCAGAGTGCATGTCCTCTATTGCTGGCTC
ATATGGTTACATTGCTCCAGAGTATGCATACACATTGAAAGTTGACCAAAAGAGTGATGTATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E300963] | SGN-U576274 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T112568 [Download] [View] | Facility Assigned ID: TRDBE58TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.980 | Expected Error Rate: 0.0102 | Quality Trim Threshold: 14.5 |
Working
