SGN ID: SGN-C10789 | Clone name: cLEC-6-E20 |  | Order Clone |
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Library Name: cLEC | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination
Microarray: Alias clone
SGN-C172676 is on microarray TOM1: SGN-S1-1-7.3.20.5
There is no map position defined on SGN for this EST or others in the same unigene.
Sequence Id: SGN-E202458 | Length: 600 bp (856 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E202458 [] (trimmed)
GGCGGATAAAATCCATGGTCTAACTGTTCCAGCTGATGGGCCACACCATGTACAAATTTTACATGAACCAATTGGGGTTGCTGGTCAAATAATTC
CATGGAACTTTCCCCTTCTGATGATGGCCTGGAAAGTTGGGCCTGCTTTAGCGTGCGGTAACACTATTGTCCTGAAGACTGCAGAGCAAACTCCA
CTGACTGCTCTTTATGTTGCAAACTTACTCCATGAGGCTGGTCTTCCTCCAGGTGTTTTAAATATTGTTTCTGGTTTTGGACCTACCGCTGGTGC
TGCACTGGCTAGTCATATGGATGTAGACAAGCTTGCTTTCACTGGATCAACGGAAACTGGACAAACAGTTCTTCAACTGGCTGCCAAAAGCAATC
TGAAACCAGTTACCCTTGAACTAGGAGGGAAATCACCTTTCATTATATGTGAGGATGCTGACATTGATCATGCTGTTGAGCTAGCACATTTTGCA
CTCTTCTTTAATCAGGGCCAATGTTGTTGTGCTGGTTCTCGTACATATGTACATGAACGAGTATATGATGAATTTGTAGAGAAGGCAAAGGCACG
TGCAATGAGACGTGTAGTTGGCGATCCCTT
[BLAST] [AA Translate]
SGN-ID: SGN-T24119 [Download] [View] |
Facility Assigned ID: TCAAV34TH
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Submitter: Koni |
Sequencing Facility: TIGR |
Funding Organization: National Science Foundation
Processed By: SGN |
Basecalling Software: phred |
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 |
Expected Error Rate: 0.0055 |
Quality Trim Threshold: 14.5 |