EST details — SGN-C1330

Search information 
Request: 1330Match: SGN-C1330
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C1330Clone name: cLEC-11-L16
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173059 is on microarray TOM1: SGN-S1-1-8.3.20.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E201833Length: 509 bp (799 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E201833 [] (trimmed) CAGGAACAGACGCTTTGTCAGTGTACGTGAGCAATGTAACCTGCAATTGTGATACCCCTGATGGTTATTGTCATGTACAAAGCATATTACTCAAA
GGACAAGATCTTGCTGGTGTTCTTCCTCCATCCCTGGCGAAGTTACCAAATCTCACCATAATTGATCTCTCATGCAACTATTTGAGTGGTACAAT
TCCCCCTGAATGGACATCGATGAAACTGGAAACCATGTCTCTTATGCTGAATCAACTATCTGGACCAATTCCGAAGTACTTAGGAAACATGACTT
CACTAGTTTATATGAGATTGGAAAGTAACATGTTTAATGGAACTGTTCCAAAAGAACTCGGAGGCATGGTTAATCTACAGATTCTCATTCTTAGT
TTTAATAATCTCACAGGTCAGCTACCAGAGGAGCTCAATAAACTCACTAATTTGAAAGAACTTAGGCTGAGAGGTAACAACTTCACAGGAAAACT
TCCTAACTTAGAGAGTTTTAAAACCCTTCAAAGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E201833] SGN-U568430 Tomato 200607 Build 2 7 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T25780 [Download] [View] Facility Assigned ID: TCABR68TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.966 Expected Error Rate: 0.0046 Quality Trim Threshold: 14.5